result

Gene information

Detail information of AfisC2G02781

Location

Gene	Chr	Start	End	Strand
AfisC2G02781	chr2	428201845	428204325	+

Sequences

CDS

Protein

Gene

>AfisC2G02781
CCCAGACCTCCTACCCTGACCTCTCCACCCTGCACTAGTGATTCCCGCTCACTATCTCTTGCAAACTGAAGTTCTTATGAATACTCTCACATAAAGATGTATGTCAAATTATTCAGAAATATTCTTAACATTTCCTCGTGAAAGCCCTTTTCCGTCCGTTCAGATGGGAACTCTCCATCATGTTCCTTTGATGGTGTGACTCCTTCAAGTGGCACAATTTGGTGGAAGGACCCCTTAAAGGGACACACAAGGCAAGGTGAGTTACGTTGAAGAACATGTGAGTGCTTCTGATTATTTACATCAGATACAACGTATCCTTTGGACGAGCACAGGGTACTATTTTTCAAACTAGTTCATTAATTATATATTAACATTTTTATTGATTATAAAGTAATCTTTTGTCATTTTTCATTGCGTTAATGCATAAGACAATGACGATACCTTAAAAACATAACCTTTTATATTTTTGAGTATCATAGATATTCAATATCATACATGTACATGAGATGTGTACAGTACCGATATTAACGCAAATGGGTAAAAAAAGAAAAAGAAAAAAAGAACACAAGTGGTTAAAAATGACAACAGTAGCCTTTACTTTGGCAAGCAGACCCAATAGCTTACCGTGACTCCTTGCTTGTAATTTCTGTAAATAGTTTTGTTTTTCAAACATTTCTATATAATATATTTTCTCACTCATTTGTTTATGCACAATGTGCAATGAATCTGAAACAGTCTCCTATCGTTTTCCATCCCGACACATTTGTGGGTCAGAACTTTTCTGAATTCATTTCCTTTTAATATCATTTTTGATTAGATTGCAGATTTCTATGAAAATGATGTTAGCCGCAACTTAATTAAATAAGTTTTTGCCCTAATCAGATTCCATTTCTCACCTAGCCCTAAAAGTCTCGGATGTGTACAAAACATTCCATAGTAGTATTTTATACATTCTGTAGCATTCATTAATCAACAAAGAATAATTGTTCCTTAATTTCTCAGTTATTTATATCTTTGGATACTACCAACTCATTCTCTCTTTCTCTCTCTTTCTTAAAAAAAAAATGGAGTTTGAGGATGAACAAGGGTTATTGGAAGAGCTACTAGCTCTAACAAGAACAGATGCATTGTGGGATTCATCTCCTTTCTTCTCTTCTACAAATTTAAGCTGCATAGACGAATCAATATTTGATCAGCAATTTTATTCTTCGCCAAACCAGTCTTCCTCCTTCAACATTTCTGAACTTCAAGACTTTGTGCCTGTCACTGAAGAGAAGAATGAATCTGATTTGTTCACATTTGCTGCCTGTACAACTTCGGTAACTGGTTGTGAGAAAAAAGTCAATTATAAAAAGAAATCCGGGGATGTGCCTTCGAAGAATTTGATGGCTGAAAGGAGAAGAAGGAAGAGGCTTAACGATCGTCTCTCTATGCTTAGATCTGTAGTTCCTAAGATTAGCAAGGTTTTTTTTTTTTTCGTTTATAAACTTAATTGATTCAAGTTTTTGTGTAATTGAAACAATTAATTGCTAATTATGTAGATGGATAGGACTTCAATTCTAGCAGACACAATTGATTACATGAAGGAGCTTCTGGAAAGGATCAAGAACTTGAAAGAGGAGATGGATGTTGACTCAGATCAAACTACAAATATACTGGGAATTTTCAAAGATATAAGCCCTAGTGAAATCTTTGTCAGAAACTCACCAAAGGTAATATATACCAATTTATTTGCTATAGAGTAATTTGCATTTATCAATTTACACAGCTTGAATTGTTCAAGGAAAACAAGCTTACCTTTTCTTTTTTAGGATAATATATATATACTAGCCAATTAATTCTAACAAAAGCATATGAATTATACATGACATGTATAAAAGTTTGAAGTGGAGAGGAGGAATGGAGGAGAAACAAGAATAGAAGTGAGTTGCGCAACAAAGCCAGGGTTACTTATGTCAACAATAAGTACATTGGAAGCAATGGGGCTTGATATTCAGCAGTGTGTTGTGAGTTGTTTTAACGATTTTGGGATGCAAGCTTCTTGCTCTGATGTAAGCATTCATATAATTAGCTACTCAAATGTTTTACAATGCTCATCTTTTTACGGTTTTTTAATATGTGATATTCTAAATTGTTCCATGTAGGATTTAGAGAAGAAGGTAAATTCTGAGGAGATTAAGCAAGCACTGTTTAGAAATGCTGGATATGGAGGGAGGTGCTTGTGATTCATATTGTGTGTGGTGTACGATTAATAATGTATGTTAATTAATTAAAAACTAAATTTAGGAGCTAATAACTGTTTGAGATTGCTTGTGGGTTATCTAATAAGATAAAAATGATTTCAATTCTCATTGGAGTATTATTTTGATTTGTAAAGTTTGGCTTTGATTGAAAGCATAGATGCATGTGAGCTATAGTTTGATGATTGCACATTGCATGTAAAAGGGATTTCAAAATCTACCTCTGTGATGGTGCCTAGAC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010275502.1	9.4e-69	PREDICTED: transcription factor bHLH93-like
Swissprot	Q9LSL1.1	4.7e-57	bHLH transcription factor bHLH093
trEMBL	A0A1U8B3W7	6.8e-69	transcription factor bHLH93-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G65640.1	56.19	2e-57	219	bHLH093	beta HLH protein 93

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G02781	AT5G65640.1	210	80	4	70	273	148	351	56.19	2e-57	219
AfisC2G02781	AT5G10570.1	246	91	7	46	273	80	315	51.63	5e-52	201
AfisC2G02781	AT1G12860.1	187	83	4	102	270	264	448	44.92	1e-38	156

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00010.23	HLH	Domain	108	150	36.3	3.7e-09

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0046983	F	protein dimerization activity
GO:0010444	P	guard mother cell differentiation
GO:0010629	P	negative regulation of gene expression
GO:0016043	P	cellular component organization
GO:0050826	P	response to freezing
GO:0045893	P	positive regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network