result

Gene information

Detail information of AfisC2G02933


Location
GeneChrStartEndStrand
AfisC2G02933chr2451184770451212782-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010932858.13.6e-202histone acetyltransferase GCN5 isoform X1
SwissprotQ338B9.17.6e-189Histone acetyltransferase GCN5
trEMBLA0A6I9RW462.6e-202histone acetyltransferase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G54610.173.596e-179 624BGT;GCN5;HAC3;HAG01;HAG1;HAT1histone acetyltransferase of the GNAT family 1

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Ortholog group
SpeciesGenes
Allium cepag2870.t1
Allium fistulosumAfisC2G02933
Allium sativumAsa0G04842.1
Arabidopsis thalianaAT3G54610.1
Oryza sativaLOC_Os10g28040.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00583.22Acetyltransf_1Family21629034.81.3e-08
PF00439.22BromodomainDomain41149380.85.2e-23

Gene Ontology
AccessionOntologyName
GO:0000122Pnegative regulation of transcription from RNA polymerase II promoter
GO:0000124CSAGA complex
GO:0000228Cnuclear chromosome
GO:0000775Cchromosome, centromeric region
GO:0000981FRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0001135Ftranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0001932Pregulation of protein phosphorylation
GO:0003713Ftranscription coactivator activity
GO:0050832Pdefense response to fungus
GO:0004468Flysine N-acetyltransferase activity, acting on acetyl phosphate as donor
GO:0005829Ccytosol
GO:0005615Cextracellular space
GO:0005671CAda2/Gcn5/Ada3 transcription activator complex
GO:0006367Ptranscription initiation from RNA polymerase II promoter
GO:0006974Pcellular response to DNA damage stimulus
GO:0007050Pcell cycle arrest
GO:0044772Pmitotic cell cycle phase transition
GO:0007219PNotch signaling pathway
GO:0007420Pbrain development
GO:0008094FDNA-dependent ATPase activity
GO:0008134Ftranscription factor binding
GO:0008285Pnegative regulation of cell proliferation
GO:0009416Presponse to light stimulus
GO:0009625Presponse to insect
GO:0009682Pinduced systemic resistance
GO:0009739Presponse to gibberellin
GO:0009751Presponse to salicylic acid
GO:0009753Presponse to jasmonic acid
GO:0009908Pflower development
GO:0010015Proot morphogenesis
GO:0010321Pregulation of vegetative phase change
GO:0010438Pcellular response to sulfur starvation
GO:0010439Pregulation of glucosinolate biosynthetic process
GO:0010484FH3 histone acetyltransferase activity
GO:0010835Pregulation of protein ADP-ribosylation
GO:0044212Ftranscription regulatory region DNA binding
GO:0016578Phistone deubiquitination
GO:0016589CNURF complex
GO:0018076PN-terminal peptidyl-lysine acetylation
GO:0030154Pcell differentiation
GO:0030914CSTAGA complex
GO:0031647Pregulation of protein stability
GO:0032403Fprotein complex binding
GO:0032869Pcellular response to insulin stimulus
GO:0032968Ppositive regulation of transcription elongation from RNA polymerase II promoter
GO:0033276Ctranscription factor TFTC complex
GO:0035066Ppositive regulation of histone acetylation
GO:0042826Fhistone deacetylase binding
GO:0043009Pchordate embryonic development
GO:0043044PATP-dependent chromatin remodeling
GO:0043565Fsequence-specific DNA binding
GO:0043966Phistone H3 acetylation
GO:0045787Ppositive regulation of cell cycle
GO:0045815Ppositive regulation of gene expression, epigenetic
GO:0046695CSLIK (SAGA-like) complex
GO:0060429Pepithelium development
GO:0065009Pregulation of molecular function
GO:0070062Cextracellular exosome
GO:0070577Flysine-acetylated histone binding
GO:0080134Pregulation of response to stress
GO:0090537CCERF complex
GO:0097194Pexecution phase of apoptosis
GO:1903146Pregulation of mitophagy
GO:1903955Ppositive regulation of protein targeting to mitochondrion

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K06062PCAF, KAT2, GCN5; histone acetyltransferaseEC:2.3.1.48 Notch signaling pathwayko04330
Thyroid hormone signaling pathwayko04919

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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