result

Gene information

Detail information of AfisC2G03103

Location

Gene	Chr	Start	End	Strand
AfisC2G03103	chr2	481715129	481716810	+

Sequences

CDS

Protein

Gene

>AfisC2G03103
TCGATTGGTTCATTCACAACCTCTAATACCAATATCTTAATCTTACCAGTTACTAATGGAGAGTTCGCTGGTCAAAGATCTGATTGCAGGGAGAGCTCTCGCATCCCATCTTCAAACTCTAATGCCTGATTCTCCAACTGCGCTTGATTTGATCGACCAGATCATGTCCTCCTTCACTAAAGCACTCGATGCTTTAAATTCTAGTGAAGCTAAAACCGATGATTCGGGCAAAAAGAGAAAGTCTTGCGTTTCTCGCAGAGGCTGTAACAGGAAAAGGTATTGTTTAACTTTTCTTATGATCGTCTTTTAATTGATTAGTTCTATAGTCGTAACTGTCAATAGCTATTCATATTTAACAGTGTATTCTCTATGTTGCAGAAGGTATGAACAAGTGGACACAATCATAGCAAATACACTCTCTGATGATAAGTTTTCATGGAGAAAGTATGGGCAGAAAGCTATTCATAACTCCAAATTTGCCAGGTAAATTTCAGGTTCAGGATCTTGATAGCCAGATAAATATGTCCGAAAAGTATTGAGAAATTAATATACAAATTGATCTACAACATATATTTTGAACAATCAGCAATAATAGTAGCTATCATCATTCTAAAATTCTGATTCAATCTTTGCACTTCTTCATTGTAAAATCGTGATTGCATTTGATAACATTCATCCAATAATCACTTGATACATCATATATGAAAAGAAAATTAACCATGATATGGAAAGAGAACGATTTTTTTCCCCTTTTTTTCCTTCAAATCTTCCAATGATTTCATTGGATTTTAGAATCAAATGATCTGCTTCTGGTATTTTAACCCAGTTTGGTGTATGCCAAGAACAAGAAATCTTATTGTCAACCCTCGACGAATTATCAAAACTACTTACAAGAAGCTTATTTCTGTTTAGCAGTAGCTTAGAAGTCAAAACTGAAAAAGCAGTTATTTATTTCTTGTACCAAAACAAGAAGTAAAACGGTATTTGATTTTGCAGGGCATACTACAGATGCACGCACAAGTACGATCAAGGATGCCAAGCCATTAGGCAAGTTCAACAGAAAGAAGATGATCCATCTCGATTTATCATTACATATATTCGAAAACATTCATGTGCAGTATCAGTCAATCTTCCTGATCCTGTATTTTCAGTTTATAATGACCCATCACTAATTAGTTTCGGATCTGCTGCTTCCACTTCTACTACACCTGAAATCTCTGTGCCATCGTATCCGCTCTTTGTTCAAAATCAGGAATATGATGATGAAGTTTTGAGCAATCTCAATGCAGAAAACTCGACCTCAGCGTTGTTTGATGAGTTACTTGATTTCTATGAAGAAAACTCGAGGTTGCCTTCATATACTAGCGATATGGATATGAGTTCAATGGTGAATTTGGGCGACTTTGAAAGTGATTTGTTTGCTGCCTTAGAATATGAGCGACGCGTTTAAATGATTATTTTGTTTGTGTAGGTTGTATATAGGAGAAACAGATGGTCCACGTATAGCGATTGTCTTTTGATGCACCCTCCCTGCATTTTCTCTTCATTTTCTCTGCACTTTAGTATTTGATTATTATTACACAGCTAGTAGATTATTCATGATGTGTAATTTTAGGGGCTTTGGAATCTCTTTCATGTAACATAATGATTATAATGAATAATATTTTGCGGGGATTCTTTTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020275661.1	3.0e-40	probable WRKY transcription factor 70
Swissprot	Q9LY00.1	2.7e-22	WRKY DNA-binding protein 70
trEMBL	A0A5P1E9V9	2.2e-40	WRKY domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G56400.1	37.64	1e-27	120	ATWRKY70;WRKY70	WRKY DNA-binding protein 70

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G03103	AT3G56400.1	178	82	5	5	155	11	186	37.64	1e-27	120
AfisC2G03103	AT2G46400.1	162	89	5	1	148	3	163	35.80	4e-20	95.1
AfisC2G03103	AT2G40750.1	94	47	1	58	151	128	214	42.55	5e-19	91.3

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	89	148	77.7	5.6e-22

Gene Ontology

Accession	Ontology	Name
GO:0001101	P	response to acid chemical
GO:0006351	P	transcription, DNA-templated
GO:0009719	P	response to endogenous stimulus
GO:0010033	P	response to organic substance
GO:0044699	P	single-organism process
GO:0050794	P	regulation of cellular process
GO:0098542	P	defense response to other organism
GO:1901700	P	response to oxygen-containing compound

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network