Detail information of AfisC2G03127


Location
GeneChrStartEndStrand
AfisC2G03127chr2485538648485555811+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020275280.15.6e-287B3 domain-containing protein Os07g0679700-like isoform X2
SwissprotQ6Z3U3.12.8e-222B3 domain-containing protein Os07g0679700
trEMBLA0A5P1E9I44.0e-287B3 domain-containing transcription repressor VAL2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G32010.146.700.0 687HSI2-L1;HSL1;VAL2HSI2-like 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag530292.t1
Allium fistulosumAfisC2G03127
Allium sativumAsa5G02934.1
Arabidopsis thalianaAT4G32010.1
Oryza sativaLOC_Os07g48200.1; LOC_Os07g48200.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family28838758.25.3e-16
PF07496.12zf-CWDomain54058249.33.4e-13

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005739Cmitochondrion
GO:0007165Psignal transduction
GO:0005634Cnucleus
GO:0009790Pembryo development
GO:0009737Presponse to abscisic acid
GO:0010030Ppositive regulation of seed germination
GO:0044212Ftranscription regulatory region DNA binding
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0043167Fion binding
GO:0043565Fsequence-specific DNA binding
GO:0048573Pphotoperiodism, flowering
GO:2000034Pregulation of seed maturation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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