result

Gene information

Detail information of AfisC2G03145

Location

Gene	Chr	Start	End	Strand
AfisC2G03145	chr2	487743025	487746243	+

Sequences

CDS

>AfisC2G03145
ATGAAGCCAACGAAGGCGGTAAGCTCACCCGCCATCTTACTTTTTTACCTTCTCTCCTCTCTCCTGTTCACCAACTCTTCTTCCTTGTCCTCCTCCGCCACCCTCTCCATATCCTCTTCCACCAACACCGTATGCGCCATTACTTCCTCCACGTCACCTCAAAACATCTTATGCACAAACCTCTTTGCAAACCCCCCCTCCACGATCCAAGTATTACCCAACACCTCCTTCCTCTCCATATCCGGTGGCCAAAGCACTTTCTGCTCCCTCCGGCCCGATTCGCTCTCCTTTCTTTGCTGGTCTACCTCCACTTTCACTCCCAAGCGTGTACACATCGGATCCCAACCCCTGTTGGATCTCTCTCTTGGATCCACCCACATATCCGCTTCAACCAACATCAGCGTCGATTTCTGGCGAACTGATTCCAGTTTCCCCCGTACAGCTCCCGGAAACTTCAAATCCCTAACATCCGGTACCGATTACAGCTGCGCAATCAACAACGTTGGCAGTAAAGTTCAGTGTTGGGGTAAAAATGGTGGTCGGATCCAGAACTTTTTCAAAAACGAGACTGTGTTGAACATAGTTGGCGGTGATATGAACGTTTGCGGTGAGAATAGTCATGGAGTTTTACTATGTACTAACACGGTTGCAGTCGGTAACGTTAGTTACGAGTATTCCAACTGGGCTTTGGGTGCTAACCATGTATGCGCAGTTAAGAGAGTAAACGGAACTGTAGTCTGTTGGGGCGGTGAAGTTGCCGGAGGTGAGTACAATCCGATTGGTGATGTTTCAGTTGAATTTTTGGTAGCAGGTGGTAACGTTACTTGTGGCGTTCTTACCAGTAACTTCTCTGTTGTCTGTTGGGTTGCCAATCGTAATAATTTGTCTGTTAGTGTTCTTCCTTTCCCTAAAATTTTGCCTGGAGTTTGCATTAAAGAAGAAGATAAGGACAAGGTATGTAGCTGTGGCATTGTGTCAGATTCAAAAAGCCTCTGCGGAGGTTCACGTGTTATTTGTCTTAACTCTTGCCCTAATGTAGAAACATCACCTCCACCACCTCCACCGTCACCACTGTATGTTATAACCGAGAAGAAAACCAGCAAGTTATGGTGGATCTTTGCCATTATTGGAGGTGTTGGCACTTTGATAGGTGTTTGTAGCATAGTTTATTGTATATGGCATGTGTTCTGCAGACAGAATAAAATTTTCAACTCTGTTCAGCCAACAGTAACAGCTACAGCTAGTAATGGTAACAATGTAGTTAGTAGGAGCAGCTCAGGAGTTGTACCAAGTCCTAGAGTTTCACCGTCGAGTTCGAAATCTAAGATATTCAGAAGACAAATCTCGAGAGCAATAATGAAAAGGCAGAGAAGCGGGCCTTCTTCATTCAAAGATCGAGCCGAGCAGTTCACATTTTCGGACCTTGTACATGCTACTAACAACTTCTCATTGGAGTTCAAGATTGGCGCAGGATCATTCGGAACAGTTTACAGTGCAAAACTACCAGATGGACGTGAAGTTGCCATTAAGAGAAGTGAGCCGAATTTGAAAACAAGAAAAGTGCAAGAGAAGGAAAGTGCTTTTCAATCCGAGCTCTCGTTTCTTTCGAGAGTTCATCATAAGCATTTGGTTGGGTTGGTTGGGTATTGCGATGAAAATGAGGAAAGATTGTTGGTATATGATTTCATGAAGAACGGTTCTTTGTATGATCACTTGCATTCGAAGAAGCAAGAGGATTCACCTATTTGTAAATCATGGAAGATGAGGATAAAAGTTTTGCTTGATGCTTCAAGAGGGATCGAGTATTTGCACAACTATGCTGTGCCTCCTATAATTCATAGGGACATAAAGTCTTCTAATATATTGCTGGATTCAAATTGGGTGGCTAGGGTTTCGGATTTTGGACTCTCATTGTTAGAGCCTACCGACAAAGATGAGCATATGTCGTTGAAAACAGCGGGAACAGTTGGGTATATGGACCCGGAATATTACGGGTTGCATCGATTAACTGTTAAGACCGATGTGTATGGCTTTGGTGTAGTGATATTGGAGGTGTTAACGGGTAAACGGGCGATCTTTAAGGGTGGGGATTCGGAAGAGGGAGGAAGTCCAGTTAGTGTGGTGGATTTTGCTATACCGAGTATTTTGAAAGGAGAGCTATTTCGGGTTTTGGATGGGAGAGTGGGTGTGCCCGGGTCGAATGAGGCGGAGGCTGTGGAGTTGGTGGCGTACACGGCTGTGCATTGTGTTAGTTTGGAAGGAAATGAAAGGCCAAGTATGACTGATATTGTTTCTAATTTAGAGAGTGCGTTAGCTCTATGTGAAGATAGCCATGGAAGTATCTCTAGTGCTAGCGTTTCTCTTGGTTCATATGATTGA

Protein

Gene

>AfisC2G03145
TTAAATTTGACAGGGATCTAATTTTTATAAATTTTATCCCATTGGATTTTTTGTGCATTATAATTAATATATGGGCTTGTTATCCTAAGATCCATTTATCATCACAATTCTTAAAATCGATGGAACCGATGGAATTTTAGCAATTAATAAAAGAAGAGTAATAATCAACGGTAGTAGCCTTTTGAATTAAATTCCACATTCATCAGCTTTTCCCATTAGTCTTCCCTTCCTACTACTCTTTGAAAACTTCCACATTGATCTCCTTTTCCTATTTTCATCCCCTCTCTTCCTCTGCTTCCCCACATGATACCATTCTCACAATGAAGCCAACGAAGGCGGTAAGCTCACCCGCCATCTTACTTTTTTACCTTCTCTCCTCTCTCCTGTTCACCAACTCTTCTTCCTTGTCCTCCTCCGCCACCCTCTCCATATCCTCTTCCACCAACACCGTATGCGCCATTACTTCCTCCACGTCACCTCAAAACATCTTATGCACAAACCTCTTTGCAAACCCCCCCTCCACGATCCAAGTATTACCCAACACCTCCTTCCTCTCCATATCCGGTGGCCAAAGCACTTTCTGCTCCCTCCGGCCCGATTCGCTCTCCTTTCTTTGCTGGTCTACCTCCACTTTCACTCCCAAGCGTGTACACATCGGATCCCAACCCCTGTTGGATCTCTCTCTTGGATCCACCCACATATCCGCTTCAACCAACATCAGCGTCGATTTCTGGCGAACTGATTCCAGTTTCCCCCGTACAGCTCCCGGAAACTTCAAATCCCTAACATCCGGTACCGATTACAGCTGCGCAATCAACAACGTTGGCAGTAAAGTTCAGTGTTGGGGTAAAAATGGTGGTCGGATCCAGAACTTTTTCAAAAACGAGACTGTGTTGAACATAGTTGGCGGTGATATGAACGTTTGCGGTGAGAATAGTCATGGAGTTTTACTATGTACTAACACGGTTGCAGTCGGTAACGTTAGTTACGAGTATTCCAACTGGGCTTTGGGTGCTAACCATGTATGCGCAGTTAAGAGAGTAAACGGAACTGTAGTCTGTTGGGGCGGTGAAGTTGCCGGAGGTGAGTACAATCCGATTGGTGATGTTTCAGTTGAATTTTTGGTAGCAGGTGGTAACGTTACTTGTGGCGTTCTTACCAGTAACTTCTCTGTTGTCTGTTGGGTTGCCAATCGTAATAATTTGTCTGTTAGTGTTCTTCCTTTCCCTAAAATTTTGCCTGGAGTTTGCATTAAAGAAGAAGATAAGGACAAGGTATGTAGCTGTGGCATTGTGTCAGATTCAAAAAGCCTCTGCGGAGGTTCACGTGTTATTTGTCTTAACTCTTGCCCTAATGTAGAAACATCACCTCCACCACCTCCACCGTCACCACTGTATGTTATAACCGAGAAGAAAACCAGCAAGTTATGGTGGATCTTTGCCATTATTGGAGGTGTTGGCACTTTGATAGGTGTTTGTAGCATAGTTTATTGTATATGGCATGTGTTCTGCAGACAGAATAAAATTTTCAACTCTGTTCAGCCAACAGTAACAGCTACAGCTAGTAATGGTAACAATGTAGTTAGTAGGAGCAGCTCAGGAGTTGTACCAAGTCCTAGAGTTTCACCGTCGAGTTCGAAATCTAAGATATTCAGAAGACAAATCTCGAGAGCAATAATGAAAAGGCAGAGAAGCGGGCCTTCTTCATTCAAAGATCGAGCCGAGCAGTTCACATTTTCGGACCTTGTACATGCTACTAACAACTTCTCATTGGAGTTCAAGATTGGCGCAGGATCATTCGGAACAGTTTACAGTGCAAAACTACCAGATGGACGTGAAGTTGCCATTAAGAGAAGTGAGCCGAATTTGAAAACAAGAAAAGTGCAAGAGAAGGAAAGTGCTTTTCAATCCGAGCTCTCGTTTCTTTCGAGAGTTCATCATAAGCATTTGGTTGGGTTGGTTGGGTATTGCGATGAAAATGAGGAAAGATTGTTGGTATATGATTTCATGAAGAACGGTTCTTTGTATGATCACTTGCATTCGAAGAAGCAAGAGGATTCACCTATTTGTAAATCATGGAAGATGAGGATAAAAGTTTTGCTTGATGCTTCAAGAGGGATCGAGTATTTGCACAACTATGCTGTGCCTCCTATAATTCATAGGGACATAAAGTCTTCTAATATATTGCTGGATTCAAATTGGGTGGCTAGGGTTTCGGATTTTGGACTCTCATTGTTAGAGCCTACCGACAAAGATGAGCATATGTCGTTGAAAACAGCGGGAACAGTTGGGTATATGGACCCGGAATATTACGGGTTGCATCGATTAACTGTTAAGACCGATGTGTATGGCTTTGGTGTAGTGATATTGGAGGTGTTAACGGGTAAACGGGCGATCTTTAAGGGTGGGGATTCGGAAGAGGGAGGAAGTCCAGTTAGTGTGGTGGATTTTGCTATACCGAGTATTTTGAAAGGAGAGCTATTTCGGGTTTTGGATGGGAGAGTGGGTGTGCCCGGGTCGAATGAGGCGGAGGCTGTGGAGTTGGTGGCGTACACGGCTGTGCATTGTGTTAGTTTGGAAGGAAATGAAAGGCCAAGTATGACTGATATTGTTTCTAATTTAGAGAGTGCGTTAGCTCTATGTGAAGATAGCCATGGAAGTATCTCTAGTGCTAGCGTTTCTCTTGGTTCATATGATTGATTTTTTTTCCTGGAGGATATTGTTTTTTGGGAGTTGTTTGGGGATACTTTTTGCTATATAGATTTGTGTACATGATTTTTCAAGGTAAAAGTTGCTACAGTTTTTTTTGGTTATTTCGTCTGTGTTCAAAATTGGCACTGAATTATATTTGCGAAGTTTCAACTAGAGATGATCCTGTTTACGCGTGTGACGCAACCGAAGCATGAAATGGGAGAACGGGTCAACCCCAGTCAAGGTCCATTGGGATGAAGGAGATGGGTATGTTCTGTAGAAGCCAATGCGTTGAACGCGAGTCCCTCTCCTATAAAATAAACTCCCCTTTTCATCCGTTAACTACAATCTTCCTGTTACTTTCCTCGTCATCCAGTCTTTCCTTCTAATGACTAATTCAGAATGAGATTCAGAAGCATATGTTCTGAACGATTTGGTTAATTTAACAACATGTCTGCAAAAAGGATGGTAGTAAAGTGAATACATATACCAACTTCCACTAATATATATTGGATTCATATGTTGTCTG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020696451.1	3.3e-215	putative serine/threonine-protein kinase-like protein CCR3
Swissprot	Q9LY50.1	2.3e-141	Protein CRINKLY 4 RELATED 3
trEMBL	A0A8J5HWD3	2.7e-219	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G55950.1	47.38	4e-177	618	ATCRR3;CCR3	CRINKLY4 related 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G03145	AT3G55950.1	821	362	23	11	788	18	811	47.38	4e-177	618
AfisC2G03145	AT5G47850.1	772	409	27	31	774	31	736	34.84	8e-105	378
AfisC2G03145	AT3G59420.1	852	417	33	17	772	14	790	30.99	5e-85	312

Ortholog group

Species	Genes
Allium cepa	g6732.t1
Allium fistulosum	AfisC2G03145
Allium sativum	Asa5G02935.1
Arabidopsis thaliana	AT3G55950.1
Oryza sativa	LOC_Os05g03620.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	484	767	141.1	3.4e-41

Gene Ontology

Accession	Ontology	Name
GO:0050832	P	defense response to fungus
GO:0004672	F	protein kinase activity
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0009705	C	plant-type vacuole membrane
GO:0009723	P	response to ethylene
GO:0009788	P	negative regulation of abscisic acid-activated signaling pathway
GO:0009791	P	post-embryonic development
GO:0009860	P	pollen tube growth
GO:0010483	P	pollen tube reception
GO:0016324	C	apical plasma membrane
GO:0030308	P	negative regulation of cell growth
GO:0031410	C	cytoplasmic vesicle
GO:0042803	F	protein homodimerization activity
GO:0043680	C	filiform apparatus
GO:0046777	P	protein autophosphorylation
GO:0051510	P	regulation of unidimensional cell growth
GO:0051924	P	regulation of calcium ion transport
GO:0080147	P	root hair cell development
GO:0090404	C	pollen tube tip
GO:0097275	P	cellular ammonia homeostasis
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network