result

Gene information

Detail information of AfisC2G03422

Location

Gene	Chr	Start	End	Strand
AfisC2G03422	chr2	538314806	538316285	+

Sequences

CDS

>AfisC2G03422
ATGATTCGCCGCCTTCTAAAATCTTGCTCCCCAAATCCCTTGAAAAAACTACACTATTCAACTTCGGCAAACCCATCTGCAAATCTAGCTCTTCATTTCCTGAGAAATTCATGTCGTCTTCCTGAAGAAACCGCTCTCCTCATCTCCAAAAAAATCAACTTAAAAAGAACAGTAACGCCTCATGCAGTCCTTTCTCTCCTCAGGTCATACAACTTTTCGGAAGCAGATATCAAAAAGGCAATCTCCCTTCTTCCACATCTCCTTCTCAAAAACCCTGCCAAAACCCTAAAACCCAAATTTGAATTTTTCGAAAAGATCGGCTTCTCAAATGCTGCATTAATCAAACTCTTCACTTGCGTTCCGCAACTGCTCCAATACAGCTTAAAAAGCAAACTCCTTCCAAACTACAAACTTTTAAAAGATATCTTACATACAGATGCAAATGTCATATCTGCAATAAGAAGCTGTGCCGTACTGCTTAAGTTCGACCTTAAAAAGATGTTACTACCCAAGGTGAAGATTCTTGAAGACAATGGAGTTTCAGTTAATGTAATTCATAAGATATTAACTATGCATAACAAGCATTTGGTAGAAAGCCCTAGCAGGTTTGATGAGATACTTGAATTTGTTAACAAGACGGGTATTAGTCCTAAAAGCGCTATGTATGCGCATGCGTTTGCTGTTCTTGGCGTGGTAAGGCGGAATAGTTGGGATATGAGAGTTGAAAATTTTAAGAAGTTAGGATGGTCTGAAGAGCAAGTTATGATAGCATTTGTAAAACATCCTTATTGTATGACAGTTTCAATCGATAAGGTTACAAAGACCTATAAGTTCTGTAAGGAGAAATATGGTTGGGACTCGGATTACGTGTCTAAAAACTCGGATGTTCTTTCGCTTAGCTTTGAGAAAAGGGTTTTGGCAAGGTATAGAATTTTGAATATTCTGCAAAGTAAAGGGTTATACTGTGGAAAAGTTGGAGTGACACAACTGAAGTTAGGAGAAAGGGATTTCTTACTGAAATATGTTGTAAAGAATTGTAAGCTAGTTCCGGAGCTTATGGATAATGATGTAAAGTGCAAGTTGGAAGAGTTTGGCTTGTTGATAGGAGATAACTAA

Protein

Gene

>AfisC2G03422
ACATGTGGACACGTTGAAATTTATTTAATTAATAATCTGAGTTTGCGGGAAAACTTCATTGAAGCTTGGGTTTTCTCGATCGATGTTGTCGAAGAACAGAACGGAGATTCAAACAAACCAAATGAGAAGAGAGGCGTCTTAATGAAGTTGGGTAGTCGTTCTTCCATAAACACAAGAAAACAATATTGCGCATAAGTTGCTCGACCAAATCCCCAATCCAAAGCCCCAGAAGATGATTCGCCGCCTTCTAAAATCTTGCTCCCCAAATCCCTTGAAAAAACTACACTATTCAACTTCGGCAAACCCATCTGCAAATCTAGCTCTTCATTTCCTGAGAAATTCATGTCGTCTTCCTGAAGAAACCGCTCTCCTCATCTCCAAAAAAATCAACTTAAAAAGAACAGTAACGCCTCATGCAGTCCTTTCTCTCCTCAGGTCATACAACTTTTCGGAAGCAGATATCAAAAAGGCAATCTCCCTTCTTCCACATCTCCTTCTCAAAAACCCTGCCAAAACCCTAAAACCCAAATTTGAATTTTTCGAAAAGATCGGCTTCTCAAATGCTGCATTAATCAAACTCTTCACTTGCGTTCCGCAACTGCTCCAATACAGCTTAAAAAGCAAACTCCTTCCAAACTACAAACTTTTAAAAGATATCTTACATACAGATGCAAATGTCATATCTGCAATAAGAAGCTGTGCCGTACTGCTTAAGTTCGACCTTAAAAAGATGTTACTACCCAAGGTGAAGATTCTTGAAGACAATGGAGTTTCAGTTAATGTAATTCATAAGATATTAACTATGCATAACAAGCATTTGGTAGAAAGCCCTAGCAGGTTTGATGAGATACTTGAATTTGTTAACAAGACGGGTATTAGTCCTAAAAGCGCTATGTATGCGCATGCGTTTGCTGTTCTTGGCGTGGTAAGGCGGAATAGTTGGGATATGAGAGTTGAAAATTTTAAGAAGTTAGGATGGTCTGAAGAGCAAGTTATGATAGCATTTGTAAAACATCCTTATTGTATGACAGTTTCAATCGATAAGGTTACAAAGACCTATAAGTTCTGTAAGGAGAAATATGGTTGGGACTCGGATTACGTGTCTAAAAACTCGGATGTTCTTTCGCTTAGCTTTGAGAAAAGGGTTTTGGCAAGGTATAGAATTTTGAATATTCTGCAAAGTAAAGGGTTATACTGTGGAAAAGTTGGAGTGACACAACTGAAGTTAGGAGAAAGGGATTTCTTACTGAAATATGTTGTAAAGAATTGTAAGCTAGTTCCGGAGCTTATGGATAATGATGTAAAGTGCAAGTTGGAAGAGTTTGGCTTGTTGATAGGAGATAACTAATTTTTTTTTGGCAAAGAATGGTAATGCTTGAGTTTGTTGTTTCCTACATGTAGCAATTGAGTCTGATTTTTTTGTTACTATTAAGGCTGATTTATATAATAATCACTCAATGAGTAACTAGCTCAAACTAAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020250225.1	8.9e-54	uncharacterized protein LOC109827619
trEMBL	A0A1R3L6K0	6.4e-54	Mitochodrial transcription termination factor-related protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G07900.1	30.75	3e-42	169		Mitochondrial transcription termination factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G03422	AT5G07900.1	348	232	3	21	359	55	402	30.75	3e-42	169
AfisC2G03422	AT1G21150.1	357	254	2	1	354	29	384	27.73	5e-36	148
AfisC2G03422	AT5G64950.1	356	233	8	18	359	26	377	29.49	2e-31	133

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02536.11	mTERF	Family	64	216	60.7	1e-16
PF02536.11	mTERF	Family	160	320	57.2	1.2e-15

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K15032	MTERFD; mTERF domain-containing protein, mitochondrial	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network