Detail information of AfisC2G03453


Location
GeneChrStartEndStrand
AfisC2G03453chr2544251876544278307-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020253488.17.2e-54truncated transcription factor CAULIFLOWER A-like
SwissprotQ6E6S7.13.4e-32APETALA1-like protein
trEMBLA0A8B7D0717.0e-51truncated transcription factor CAULIFLOWER A-like isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G69120.144.153e-37 151AGL7;AP1;AtAP1K-box region and MADS-box transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag451958.t1
Allium fistulosumAfisC2G03453
Allium sativumAsa0G01154.1; Asa6G01457.1; Asa8G03429.1; Asa8G03432.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain105786.16.9e-25
PF01486.14K-boxFamily9617838.49.8e-10

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0009987Pcellular process
GO:0044767Psingle-organism developmental process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.