result

Gene information

Detail information of AfisC2G03493

Location

Gene	Chr	Start	End	Strand
AfisC2G03493	chr2	550587990	550589037	-

Sequences

CDS

Protein

Gene

>AfisC2G03493
GCCCTCTTAATATACATAAAAACCAGGGGTATTCCGTTCGCACACTTAAAATAACAAAGAATATTGACACGTTCCCTTCTCTATATATGTACCAAGTTGTGTGCAATGCAAAGAATCACAAGTATTTCATCAACATGGAGTGCTACCAACAACTATTATACTCATCCCAAACACCATTAATCGACTCCTTGATCGGTAATAACATTGGTCCAAACATCGTATCCAATCCAATGGAGAACATCATCATTCTTGATGATTGTTTCCTAAACAATGTGCTTGATACTGGCATCAGCTTTCCTTCAGATCTATTTACCAACTCTCCTAACCAAGCTCCAAGTCAATTTGGCAATGATATAGATTCAAATCCCAAGGAAAGTTTTATTGAAGGCACTTCTTTATCATCAGGAATAACAGAAAAACCAAAGAGGGAACGTTGTAAGACTATACTGTCAGAGAGGAAAAGGCGGAGCAGGATGAAAGGGGACCTATATGAGCTTAGATCGTTAGTTCCTAACATAACAAAGGTTTGTTATTTCTCCTTACCGTTCCTCTAAAATATCATACAAAAAAAGAGTACATTAATCACATTTTGCATATAATGTAGATGGATAAAGCCTCTATCATAGGTGATGCTGTGGTTTATGTGAAAAGTCTCCAAAACGAAGCAAAGAAGTTAGAAGATGAAATCTCAATTCTGGAATCATCAACCAGAAAAAATCAAGTCGTTCAACTTAAGCAAGTGCGACTACACAACAGCCAATGTGGGGGTAAGGTAGCCAACTTGATGGTTCATGAGGTGGAAGGAGACAAATTTTATGTGATCATAGAGTGCCATAAAGGAAATGGAGTCGTAGCAGCTCTTTATAGTGCAATTGAGTCTCTGGATTGTTTGCATGTTGAAAATTCTAGCCTCTCCTTAGCTTCTGGCAGCGTACTAATGAAACTATCGATGCATGTGCGGGAAAATAAGGAAATGATGGATGCACCATCATTGAGATTGTGGTTAATGGGTGCTCTTCTCAAGGAAGGATTTTCACTCAAAATATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020250256.1	3.4e-48	transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like
Swissprot	Q0V7X4.1	3.6e-31	bHLH transcription factor bHLH029
trEMBL	A0A1R3L6J2	2.4e-48	BHLH domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G28160.1	37.55	5e-38	154	ATBHLH029;ATBHLH29;ATFIT1;BHLH029;FIT1;FRU	FER-like regulator of iron uptake

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G03493	AT2G28160.1	269	121	7	58	291	57	313	37.55	5e-38	154
AfisC2G03493	AT5G57150.4	205	115	5	83	267	15	218	33.66	9e-19	90.9
AfisC2G03493	AT5G57150.1	206	118	5	83	269	15	219	33.01	4e-18	89.0

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00010.23	HLH	Domain	122	164	31.9	8.5e-08

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0006952	P	defense response
GO:0005634	C	nucleus
GO:0009718	P	anthocyanin-containing compound biosynthetic process
GO:0010039	P	response to iron ion
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0043425	F	bHLH transcription factor binding
GO:0048657	P	anther wall tapetum cell differentiation
GO:0071241	P	cellular response to inorganic substance

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network