result

Gene information

Detail information of AfisC2G03546

Location

Gene	Chr	Start	End	Strand
AfisC2G03546	chr2	556449033	556450221	+

Sequences

CDS

Protein

Gene

>AfisC2G03546
ATGCTGCCTATAGCTGTTGAGGATGTCAAACGAGAAGTCAAGATTTTGAAAGCCCTTAAAGGCCACGAGAATGTTGTCGAATTTCACAATGCTTTTGAAGATGATTCTTATGTATATATAGCTATGGAGTAAGTTTAGTTTATCCAGATATATACAAAATAAAATCCTCGCATATGTTTTGATATGATTAGCGAAATACGTCTACTTGTAATTCATTTTCTTAGTAGAAAAGTTTGTTTATTGTTTATTTTCTCTCCTCTTATTAGGTTATGTGATGGTGGTGAATTACTTGACCGCATACTAGAAAAGTAAGTTTTATTTTTGGTTAACATGTCTATCCAATTTCAGTTTCACATGAATATACAAACTACAGTTTATCTGGTCTAGTGAAAAACATTAACTAATCTTGCTTACCATTATTTTCTTCAGAAAAGATAGTCGGTACACCGAAAAAGATGCCGCAATCATTGTACGTCAAATGCTCAAAGTTGCAGCTGAGTGCCATCTGCATGGTTTAGTACACCGTGACATGAAGCCTGAGGTACATTTTTCTTTAAACTTTTAATCATATATATAAAGCAATGAATATTAACTACTCACGAATTCATACCTAAATCATTTTCATTCCCAGAACTTTCTATTTAAATCAAAGGACACTGATTCACCTTTAAAAGCAACTGATTTTAGTCTATCAGATTATATTAAGCCAGGTTTGTCCAAACAACCATAGTTTGCACTACAAAAGAAGCATTGAAAATTTCAAGAATTTGATGTAAAATTTATTTAAATATAGGGAAGACATTTCATGACATAGTTGGTAGTGCGTATTATGTAGCCCCAGAAGTATTAAAGCGCAGATCTGGACTAGAGTCTGACGTGTGGAGCATTGGTGTGATTACTTATATTTTGCTATGTGGAAGGCGTCCATTTTGGGATAGAATGGAGGATGGAATATTTAAAGAGGTAAATTCAGTCATATATTACATTTATGTTTGAATTACACATGCTTGAATATTTGTTTTAGAATTTCTAACCGTTCATTTTATAAATTGAATGTTACAGGTTTTGAGAAACAAGCCCGATTTTAAAAGAAAACCTTGGCCAACTATAAGCCATAGTGCCAAAGACTTCGTTCAGAAAATGTTGGCGAAAAACCCTCGTACTCGGTTAACTGCAGCTCAAGCTTTGT

Functional annotation

Database	accession number	e-value	annotation
nr	AIZ68218.1	1.4e-110	calcium-dependent protein kinase 28-like protein
Swissprot	Q9FKW4.1	6.1e-108	Calcium-dependent protein kinase 28
trEMBL	A0A0A7LYX2	9.8e-111	Calcium-dependent protein kinase 28-like protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G66210.4	85.84	9e-112	399	CPK28	calcium-dependent protein kinase 28

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G03546	AT5G66210.4	219	31	1	219	99	317	85.84	9e-112	399
AfisC2G03546	AT5G66210.3	219	31	1	219	99	317	85.84	1e-111	398
AfisC2G03546	AT5G66210.1	219	31	1	219	99	317	85.84	1e-111	398

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	8	219	185.7	9.5e-55

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005509	F	calcium ion binding
GO:0051015	F	actin filament binding
GO:0006952	P	defense response
GO:0005576	C	extracellular region
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0004702	F	receptor signaling protein serine/threonine kinase activity
GO:0004723	F	calcium-dependent protein serine/threonine phosphatase activity
GO:0035556	P	intracellular signal transduction
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005885	C	Arp2/3 protein complex
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009825	P	multidimensional cell growth
GO:0009931	F	calcium-dependent protein serine/threonine kinase activity
GO:0010090	P	trichome morphogenesis
GO:0010150	P	leaf senescence
GO:0010286	P	heat acclimation
GO:0018105	P	peptidyl-serine phosphorylation
GO:0034314	P	Arp2/3 complex-mediated actin nucleation
GO:0046777	P	protein autophosphorylation
GO:0080092	P	regulation of pollen tube growth

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network