result

Gene information

Detail information of AfisC2G03596

Location

Gene	Chr	Start	End	Strand
AfisC2G03596	chr2	569599547	569602301	-

Sequences

CDS

>AfisC2G03596
ATGGTATTCCCGTCCCTCATCTATCTACTGATATTGGCATTGCTTGCTATTGGCCAATTCCAGGCTTCACCTGATAATTCAACAGTTTGTGCACCACAAACCAGCCTATATCCACTTAAGCCAGGTGGAGAATGCATCAACAATGCAACAAAAAATGAGGAAATTACAGTATGGGAATATGTAAATACCACCAAATGTTGCAGAAATACACTCAACACGATTTCTCAAGTCTTAGCTTTATCAGCCTCCTCAAACAAAGACACAATGTTTCCAAGCAAGCAAGTATGGAATGAGTGCTCTTCTCATTTTCTAAGTCAAGACAACATTAACTGCAAATTTGACAACTTGTACAAAGAAAATGGACGGTGCTCGCAGCTTACTGTAACTTCTTTCAGTACTGAATATGGAGATTTGTTCAATTCAACTTTAAACAATTGTACACAATTCAGTACTTCCACATTCGATGATCAGTGTCGTATATGTAGTGACAGTGTATCAGGTTTGATAGAGAATGTAATTGATAATCTTGGAGTGAGAGGAAATACAAATGAAGAAGAGATATGCAGTATTGCAGCTGTTACATCTGTTGCTTCTGCTGATATATCAAATGTTACTTGGGTCGATAACTTCTATAGATGCTTGCCAGTTTTGGATTTTACTGTGGAAGCTACTGACCCTGCAGATCACTACTACAAAGTCCCACGTGGAACTGTTAAAGAAATATTTGTAATACTAGTCGCGGGACTTGGAATGGTTCTCTTGGTTCTTCTAATCAAGCTAGTGATTCGACAAAATATTGATAAACCTGTCGAAGGCAAAATAATTAGCAAGTGGTCAGGTCTATATAGATTTTCGAAAGCAGAAATCGAGAAGGCAATAAACTATGGTAATAGCAAAGTTAGCCTAGGGTCAGGAAGTGCAGGTCGGGTATATCAAGGCGTTCTACCTAGTGGACAACTTGTAGCAGTTAAGCATATTTACAAGACTGCTATGTCAGACTCGTTTACTAGAGAAGTGGAGCGTTTGTCAAAAATTCGACATCCTAATTTAGTCTGCCTTCTTGGCTGCTGTGATGAGAATGGAGCGCAGTATTTGGTTTATGAATACTGCAGTAATGGCAATCTTGCGCAGAATCTTTTACGGAGTGAGAGGGTTCTCCCTTGGGATAGAAGAGTGAGGATATTAAAAGATTGTGCACTTGGTCTCAAATTTCTTCACACACATCCAGATGGTTGCATTGTCCATAGAGATATCAAGCTGACGAACATTCTACTAACGGAAACTATGGAACCCAAGCTTTCGGACTTTGGATTAGCAAGGCTGCTTAAGATAGAAGAAAGCAAAGTATTTACAGATGTTAGAGGAACTATAGGATACATGGATCCCGAATACATGACAAATGCAAAGCTCACATGTGCAAGTGACGTGTATAGTTTTGGTATTGTCGCTCTGCAACTGCTATCCGGGAGAAAGGTAATAGAATTGGATATCGAAGCTCGAGAATCGTTAACTACAAAGGCAAAGGACGTTTCAAATGGGAGACGCCCACTTACCGATTTTGTTGATCCTCGACTTAACGGTGAACTTAATTTGAAGGATTTCGAGTCCATATTACGTGTTGCAGTGCTCTGTGTTGCAAGTTCAAGCAGGGGAAGGCCAACAACTAAAGATGTTTATGATGAGATGAATAGAGCTTGGAAAAACACATTGCCAAGCAAAATGCGTGCCCTAGCCAGAAGAGATAACAATGTGTCCATGTCACAATCTCTTTCCAATGATATCGAAGTTTAG

Protein

Gene

>AfisC2G03596
ATAATTTCTACTACTGTCAACTTACCATTAATAACAAAATAAATAAGAAGTATTATGGTATTCCCGTCCCTCATCTATCTACTGATATTGGCATTGCTTGCTATTGGCCAATTCCAGGCTTCACCTGATAATTCAACAGGTGTTTTGTTGGCTTTTATATACCATATTTTCCAGTATTCTTTTAACCAGCCATATAACGATTCACTTTCTTTATCTTTCAGTTTGTGCACCACAAACCAGCCTATATCCACTTAAGCCAGGTGGAGAATGCATCAACAATGCAACAAAAAATGAGGAAATTACAGTATGGGAATATGTAAATACCACCAAATGTTGCAGAAATACACTCAACACGATTTCTCAAGTCTTAGCTTTATCAGCCTCCTCAAACAAAGACACAATGTTTCCAAGCAAGCAAGTATGGAATGAGTGCTCTTCTCATTTTCTAAGTCAAGACAACATTAACTGCAAATTTGACAACTTGTACAAAGAAAATGGACGGTGCTCGCAGCTTACTGTAACTTCTTTCAGTACTGAATATGGAGATTTGTTCAATTCAACTTTAAACAATTGTACACAATTCAGTACTTCCACATTCGATGATCAGTGTCGTATATGTAGTGACAGTGTATCAGGTTTGATAGAGAATGTAATTGATAATCTTGGAGTGAGAGGAAATACAAATGAAGAAGAGATATGCAGTATTGCAGCTGTTACATCTGTTGCTTCTGCTGATATATCAAATGTTACTTGGGTCGATAACTTCTATAGATGCTTGCCAGTTTTGGATTTTACTGTGGAAGCTACTGACCCTGCAGGCAAGTAATATATTTTGTGCGTGTATATGTGCATATCTTTTTTCTATAAATTTACTGACATTCCTACATTTTTCATCTGTGCCTACAAAGATCACTACTACAAAGTCCCACGTAAGTTCTGTATTGATACGAGTCGTATAACAAGGTGAATATATTTCATTTTCTAACTATTTAAGTCTTTGGGTTAAATCAGGTGGAACTGTTAAAGAAATATTTGTAATACTAGTCGCGGGACTTGGAATGGTTCTCTTGGTTCTTCTAATCAAGCTAGTGATTCGACAAAATATTGATAAACCTGTCGAAGGTATGTGTCATCTTCTTGAATTCTTGTTTCAAGTCCTTTAAAAATCGGCGTTAGTTACGTATCAAATCAAATATATTGACCAAGAACAATATCATAAAGTTTAAGAGGGACTTTAACTTTTGAAAGCTAGGCACACACATGTTGTATTAACTTTTTGGCCACAAGAAAATATAGTGACACATTTTCTATATTCTTGGATTCACTAGGCAAAATAATTAGCAAGTGGTCAGGTCTATATAGATTTTCGAAAGCAGAAATCGAGAAGGCAATAAACTATGGTAATAGCAAAGTTAGCCTAGGGTCAGGAAGTGCAGGTCGGGTATATCAAGGCGTTCTACCTAGTGGACAACTTGTAGCAGTTAAGCATATTTACAAGACTGCTATGTCAGACTCGTTTACTAGAGAAGTGGAGCGTTTGTCAAAAATTCGACATCCTAATTTAGTCTGCCTTCTTGGCTGCTGTGATGAGAATGGAGCGCAGTATTTGGTTTATGAATACTGCAGTAATGGCAATCTTGCGCAGAATCTTTTACGTAAGTTATTTGTGTATTTTGGCTTATCTTGAGTAAGTTCTACTCTGAATAGTTAATAATGTATGCAGGGAGTGAGAGGGTTCTCCCTTGGGATAGAAGAGTGAGGATATTAAAAGATTGTGCACTTGGTCTCAAATTTCTTCACACACATCCAGATGGTTGCATTGTCCATAGAGATATCAAGGTATATGTTATCTGCTTTGCAAAAGAGAGAATCTACTTTATCCTTCTATATTGAACAAACGAGATTAATCATGTGATGTTTTTATATTTATATATCTGTGCAGTTGTGCAGACAAAAGTTTGTATAGGTTTTCAAAGCATAAAGTATATTTTCAATCAGTATGAATTATTTTATTGTTTGTAGCTGACGAACATTCTACTAACGGAAACTATGGAACCCAAGCTTTCGGACTTTGGATTAGCAAGGCTGCTTAAGATAGAAGAAAGCAAAGTATTTACAGATGTTAGAGGAACTATAGGATACATGGATCCCGAATACATGACAAATGCAAAGCTCACATGTGCAAGTGACGTGTATAGTTTTGGTATTGTCGCTCTGCAACTGCTATCCGGGAGAAAGGTAATAGAATTGGATATCGAAGCTCGAGAATCGTTAACTACAAAGGTACCATGTTAATATATTGATGTGCAATTTGGCTACTTTAATTTAGATTTTAAGCTTCGATCCTGAACTTGTGCTTAACGTATAACAGGCAAAGGACGTTTCAAATGGGAGACGCCCACTTACCGATTTTGTTGATCCTCGACTTAACGGTGAACTTAATTTGAAGGATTTCGAGTCCATATTACGTGTTGCAGTGCTCTGTGTTGCAAGTTCAAGCAGGGGAAGGCCAACAACTAAAGATGTTTATGATGAGATGAATAGAGCTTGGAAAAACACATTGCCAAGCAAAATGGTATGTAAACTTTATAAACTAGCTTCATATGAATTAAGTATGATGATTTTGTTTACTTTATTTTGTAGCGTGCCCTAGCCAGAAGAGATAACAATGTGTCCATGTCACAATCTCTTTCCAATGATATCGAAGTTTAGATGCTGGAAATGTGGAAATCATTGCGAAGCGCAATGTTGTACA

Functional annotation

Database	accession number	e-value	annotation
nr	CAD1820268.1	6.2e-182	unnamed protein product
Swissprot	Q8RWW0.1	5.1e-48	Protein ABNORMAL LEAF SHAPE 2
trEMBL	A0A6V7NP05	4.4e-182	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G79620.1	39.66	3e-49	193		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G03596	AT1G79620.1	290	165	5	280	562	622	908	39.66	3e-49	193
AfisC2G03596	AT2G20300.1	314	197	3	284	594	337	648	35.67	7e-49	192
AfisC2G03596	AT2G28960.1	321	181	8	283	594	562	875	38.63	2e-48	190

Ortholog group

Species	Genes
Allium cepa	g296901.t1
Allium fistulosum	AfisC2G03596
Allium sativum	Asa0G00295.1; Asa6G02609.1
Arabidopsis thaliana
Oryza sativa	LOC_Os11g26140.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	299	499	150.9	3.8e-44

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0002221	P	pattern recognition receptor signaling pathway
GO:0004674	F	protein serine/threonine kinase activity
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0046777	P	protein autophosphorylation
GO:0048731	P	system development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network