Detail information of AfisC2G03598


Location
GeneChrStartEndStrand
AfisC2G03598chr2570416276570419547-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrQGH84103.11.8e-46dof zinc finger protein DOF5.6
SwissprotQ9FM03.21.2e-31Protein PHLOEM EARLY DOF HCA2
trEMBLA0A649UCE81.3e-46Dof zinc finger protein DOF5.6

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G62940.160.983e-36 148DOF5.6;HCA2Dof-type zinc finger DNA-binding family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag296881.t1; g296884.t1
Allium fistulosumAfisC2G03598
Allium sativumAsa0G04232.1
Arabidopsis thaliana
Oryza sativaLOC_Os02g47810.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02701.12zf-DofFamily63119113.33.7e-33

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0046872Fmetal ion binding
GO:0005634Cnucleus
GO:0010052Pguard cell differentiation
GO:0010118Pstomatal movement
GO:0010200Presponse to chitin
GO:0044212Ftranscription regulatory region DNA binding
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding
GO:1902066Pregulation of cell wall pectin metabolic process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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