result

Gene information

Detail information of AfisC2G03892

Location

Gene	Chr	Start	End	Strand
AfisC2G03892	chr2	623807306	623808671	-

Sequences

CDS

Protein

Gene

>AfisC2G03892
ATGGATTCTGGAAGTGGGTTTTTTTCAATGGAAGAACCCCATTTAGATCCGAAGTGGCTTATTGATCCTAAGCTGCTTTTCGTTGGTCCAAGAATTGGAGAAGGTGCTCATGCTAAAGTATATGAGGGGAAGTAAGTACTATCCGGTTTTGTATGACTATGAAAAAGTTGAGTTTTATTCGGATTTTTTTGTACGTTTTGTGTAGGTATAAGAATCAAAATGTTGCTATTAAAATTTTGCACAAAGGGGATACGGCAGAAGAAATAGAGAAGAGAGAGGGTAAATTTATGAGAGAGGTTTCTATGCTTAGTAAAGTTCAGCACAAAAATCTTGTAAAGGTTGGATTTTGATTTATTTTTTGTTGATTCAAATTTGTTATCTTACTGTTATACTGTTAGATTCAACTTGGTTGTCCATAACCTCTCACTGAATTGCATGAATTAACCACGACAACATATTCCTGATAATAGGCAAATAAATTATTAGCATCATAAGGATTCAACCCTTGCATTTTGCACTGGCCAGATGAACTATTGTTGCGGATAGTTTAATTTAGATGGCAGTTGATTATCTATTACTTTTACTGCAGTCCAAAATAATATCTGTTATTCTCTAATGTTGCATGAACATAAGATATAGAATGAATCTATTACTACATGAGTTATTTGTATGTTCTTTATCCACCTTTGTATCCAAGCAAAGTTATTAGCAAGATACTGTAATCTATGGCATCAAACTCAAATTTAAAACTACTTACCGGCCTATAGGACACGTTCTATGTACAGTAAGAGTAGAACATCCATCTCTTATAGAGTGTTGAAGAAAACTCCAACTAAAGAAATAAATTTAATTGGTTTCCTTTCAGTTTTCCAATAACAACTTTATAGGGTATTGGGAATGCTCTTAGAATAGGAGACTGTAGTACCTCTACTTAGAAGTAAATTCAATAGCTAAACATCATCTAGCTGATTTGTATGCTTATTACATGATGAGTGGGCTTGCTATGGAAGTGTTAGAATATGGGTGATGAGTGAGATTGCTATGGAAGGAGAGACTGATAAAGAGTGATCTGTTGTGTTTAAAGATAGTAGACAGTTAGATATAAACTATACGGGCTTGAAATTTATAATACTATATGCAGTTCATTGGAGCTTGCAAGGATCCCATGATGGTGGTGGTAACCGAGCTTCTGTTAGGAGGATCATTGAGAAAGTACTTGCTGAATATGAGGCCAAGAAGTTTAGACCTTCGTGTGGCAGTAGGATTTGCATTGGACATTTATAGAGCCATGGAATGCTTGCACTCTCATGGAATCATTCATCGTGATCTGAAACCTGGTAAAAATATCTATATATTAGGAGATTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020245673.1	8.9e-75	serine/threonine-protein kinase HT1-like
Swissprot	Q9ZQ31.2	8.7e-27	Serine/threonine/tyrosine-protein kinase 13
trEMBL	A0A5P1EBB2	6.4e-75	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G27560.1	73.46	2e-69	258	ATN1	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G03892	AT3G27560.1	162	42	1	1	162	1	161	73.46	2e-69	258
AfisC2G03892	AT5G40540.1	153	39	0	1	153	1	153	74.51	1e-66	248
AfisC2G03892	AT5G50180.1	162	39	2	1	162	1	155	71.60	1e-65	245

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	30	152	93.7	9.9e-27

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0001666	P	response to hypoxia
GO:0004674	F	protein serine/threonine kinase activity
GO:0005789	C	endoplasmic reticulum membrane
GO:0009686	P	gibberellin biosynthetic process
GO:0009744	P	response to sucrose
GO:0009750	P	response to fructose
GO:0009873	P	ethylene-activated signaling pathway
GO:0046777	P	protein autophosphorylation
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase
GO:0071281	P	cellular response to iron ion
GO:2000035	P	regulation of stem cell division
GO:2000069	P	regulation of post-embryonic root development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network