result

Gene information

Detail information of AfisC2G03992

Location

Gene	Chr	Start	End	Strand
AfisC2G03992	chr2	643352186	643355507	+

Sequences

CDS

Protein

Gene

>AfisC2G03992
ATGGGGAATTGCTTCTCCAACAATAAATCCAAAACTTCGCCTCCTCCTCAACAAAATGAAAATGAAAAGGAAAACGAAAACGAAAATGAAAACTCAAAGGCCGAAAATCCAGAGCCATCCCCAACTACCCAACCACCCCAAGCTTCTCCTCCACAGACCCAACCATCGCCAAAACCAGCCCAAAAGCCTGCTAAACAAAGCCCAATAGGTCCTGTTCTAGGAAAACCTATGGAAGATATAAAAGCCACATACTCCATAGGCAAAGAACTCGGTCGTGGTCAATTCGGTGTTACGCATCTATGCACATTGAAGTCTACTGGACAACAATTTGCTTGCAAGACGATTGCGAAAAGGAAGCTTGCGAACAAGGAAGACATAGAAGATGTTAGGAGAGAAGTGCAAATAATGTACCATTTGGCTGGGCAGCCTAATATCGTGGAGTTAAAGGGTGCTTATGAAGATAAGCATAACGTCCATTTGGTTATGGAGCTTTGTGCTGGTGGAGAGCTTTTTGATAGGATCATTTCTAAAGGGCATTACACGGAGAGAGCTGCTGCGTCATTGTTGAGGACTATCGTGCAAATTGTGCATACGTGCCATTCTATGGGAGTGATTCATAGGGATTTGAAGCCTGAGAATTTCTTGCTTTTGAGTAAGGATGAAGATGCTCCTCTGAAAGCTACTGATTTTGGTCTCTCCGTTTTCTTCAAGCAAGGTTTGTCATTTTAAAAGCATTTTATATTTTGAATTTTTCAAAAATTTTGAAACGTGCTTGCTTTACAATTTCCCAAAACTTATTTTTCAAAACACTCATTTTTCAAAATACTTTTGCATGTATAGATCAAATTAAGATACAACTATCTAGAATGTTTTGAATACTCTAAAGTTGCATCTATTTATAAATTCTCTAAAATGCAATAAAATAGTAAAAAAGTCAAAAAATAATAATAATATATAAGTACATTAGAAACTACAAGAAATTCAATAAAATTTGAAAAATTGGGAGAAAAAAAAATCAAAACTAGATTCTATAAATTTGGGAAATTAAGTAAAAAAAAACATGGTCTTAATTTCCTCTTTAGATAAATAGAAGATGCTCATAGCGTTCTGTATGTATGCATTGTGCTTGATATTTGCATTGTACATGACATGAAACTCCTTATGCATTCAGATACAAAACATGCAGCATATTCGCTGAATACTGCTTTAACACGTTTTATCTGTCTCTATTAAAAGATTGCATCACCGAATATATGTGATTGAAAGCATAACATGTTCAAATAAAACAGGTGAGGTGTTTAGAGATATAGTTGGTAGTGCTTATTACATTGCACCGGAAGTCCTGAAGAGAAAATACGGACCAGAAGTTGACATATGGAGCATAGGCGTCATGCTGTATATTCTTCTTTGTGGCGTTCCTCCATTCTGGGCAGGTAAATTTGTAGTATTCACCATCTAATTAATCCCTTTTTATATAAACAGTGAACCAGATGATAACATAATTTATTCACCCACCAGAATCCGAAAATGGAATTTTCAAAGCTATACTTGAAGGCCCAATTGATTTGAGTAGTGATCCATGGCCAAACATTTCAGATGGTGCAAAGGATCTCGTCAAGAAGATGCTTTGTAAAGATCCGCAGAAACGTTTAACAGCTTTCCAAGTTCTAAGTAAGTGCACATATTATCGTATTTTCTCTCCACCTTTTCTCGTTTTCTTAAAAACTTTTTTGAGATCACGATGAAACTGGTTTCAGATTATGTGTGAAGGTGAAATGTAATTGATTCTTATGAAATAAAACATACAGATCATCCATGGATTAAAGAAGATGGAGAAGCGCCCGATACACCACTTGATAATGCTGTACTCAATAGGTTGAAACAGTTCAGGGCTATGAACCAGTTCAAAAAGGCTGCATTGAGGGTACCTTCATATTCTATTATCCTCGCCTACTTTAAAATCATGCATATAGAAATTTTCTGGAGCAGCAAAATTACTGCTTCAAGTTATGTCAATTCTTTGCATTTAGATGTAAATTGCAAAAAATCCCTACAAAAGTAATAAATTGCATAGAAATCCAATATTAGTTATGAATCATTGCATACATAAACACGTTCCATGCATTGAGATTTAAAGCATGAATTTTTCTGCTCTAGTGAATCTAGCAGAAAACGTCCCTTCATGTATAGTTGTACGATTTGCATGAATAATAAATCCTTAAATGTCATTTAAACAATATTACATAGGTAATAGCAGGCTGCTTATCAGAAGAAGAGATCCGAGGTCTAAAAGAGATGTTTAAAGGCATGGACACTGATAACAGCGGAACCATTACCCTCGAAGAATTGAAAAAGGGACTTTCAGAGCAGGGTACTAAATTATCCGAATATGAGGTCAAACAACTAATGGAAGCTGTAAGTTCAATTAACAAAATTCAAGCATCTGTTGTGCTTATTTGCCTAATTATATACATAAAATAAAACCATTTTGAAAATGCTTAAAATTTTGCTGACATAGGCTGATGCTGATGGAGATGGAACGATAGATTACGAGGAATTCATCACTGCAACAATGCACCTGAATAAAATGGACAGAGAAGAGCATCTCTTTGCTGCATTCCAGTACTTCGACAAGGACAATAGCGGGTAAGCTTAATTTACAAAAGTTATTAGCATTGTATATTTGAATGTTTCTTTTCTGACTATAATTTTTGTGTGAAGGTTTATTACAAGGGAGGAACTCGAACAAGCTCTAAAGGAGAAGGGGTTATACGATGGAGAAGAAATCAAGGAAATCATTGCTGAAGCTGATGCTGACAATGTAAGCAAATCATACAGTACTGTTGTGCCTTTGTTATGTTATAATAAAGCAGAAAAATAAAATAAAAGAGTTAATGCAGATTTATCTAGCTAATAATAAAACATACTTGTCACGTGAATTTTCGTGTGTTTGTGCAGGATGGAATGATAGATTACGATGAGTTTGTGGCAATGATGAGGAAAGGAGACCCTGAAGCAGTTCCAAAGAAGCGACGGGACGTAGCTTTCTGATTTAAGAAACATGAACAAACTCAATATTTAGGGGAAAGAAGTTTCAAAAGTCTACTATTTTAGCATTATTGTGAAAGAGATGAGAGAAGTAAATTTGCATTTATGGAACTTGAGTTCATAATATATGGATGTAGATGCAAAAGTTTAGTCCATGGGGATCTTTGTATATAATATCTATCATGCGTGTTGAGAGTGAGATTACTTGGGGGTATTTATTTTGCTTTCTATGGTATGTGCTGCATGGCTTGATATGACTCATCAGTTGTATAGG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020250035.1	7.2e-206	calcium-dependent protein kinase 2-like
Swissprot	Q9FMP5.1	4.3e-203	Calcium-dependent protein kinase 17
trEMBL	A0A1R3L702	5.2e-206	Calcium-dependent protein kinase 34

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G12180.1	76.71	0.0	867	CPK17	calcium-dependent protein kinase 17

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC2G03992	AT5G12180.1	541	109	3	1	538	1	527	76.71	867
AfisC2G03992	AT5G19360.1	538	114	2	1	538	1	522	75.84	854
AfisC2G03992	AT4G23650.1	465	138	0	70	534	64	528	70.32	708

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	84	342	252.1	5.1e-75
PF13499.3	EF-hand_7	Domain	390	450	48.8	6.4e-13
PF13499.3	EF-hand_7	Domain	460	522	46.3	4e-12

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005509	F	calcium ion binding
GO:0005739	C	mitochondrion
GO:0005773	C	vacuole
GO:0005829	C	cytosol
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0009651	P	response to salt stress
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009931	F	calcium-dependent protein serine/threonine kinase activity
GO:0010119	P	regulation of stomatal movement
GO:0010359	P	regulation of anion channel activity
GO:0018105	P	peptidyl-serine phosphorylation
GO:0019903	F	protein phosphatase binding
GO:0046777	P	protein autophosphorylation
GO:0080092	P	regulation of pollen tube growth

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13412	CPK; calcium-dependent protein kinase	EC:2.7.11.1	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network