result

Gene information

Detail information of AfisC2G04045


Location
GeneChrStartEndStrand
AfisC2G04045chr2655677471655714014+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020247091.18.0e-177LOW QUALITY PROTEIN: cyclin-dependent kinase F-1
SwissprotO80345.17.4e-135CDK-activating kinase 1-At
trEMBLA0A5P1FRV53.3e-172Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT4G28980.152.601e-138 489CAK1AT;CDKF;1CDK-activating kinase 1AT

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain26176110.11.1e-31
PF00069.22PkinaseDomain27540770.01.8e-19

Gene Ontology
AccessionOntologyName
GO:0000079Pregulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000082PG1/S transition of mitotic cell cycle
GO:0005515Fprotein binding
GO:0006360Ptranscription from RNA polymerase I promoter
GO:0005829Ccytosol
GO:0004693Fcyclin-dependent protein serine/threonine kinase activity
GO:0005654Cnucleoplasm
GO:0006974Pcellular response to DNA damage stimulus
GO:0008283Pcell proliferation
GO:0010078Pmaintenance of root meristem identity
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0019912Fcyclin-dependent protein kinase activating kinase activity
GO:0031325Ppositive regulation of cellular metabolic process
GO:0045023PG0 to G1 transition
GO:0060271Pcilium morphogenesis
GO:0070816Pphosphorylation of RNA polymerase II C-terminal domain

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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