Detail information of AfisC2G04165


Location
GeneChrStartEndStrand
AfisC2G04165chr2682705792682730221+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAGC31682.17.8e-117MADS-box transcription factor
SwissprotQ40704.12.7e-82RMADS222
trEMBLL7T9X95.6e-117MADS-box transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G18960.166.678e-83 303AGK-box region and MADS-box transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain105792.19.2e-27
PF01486.14K-boxFamily8717391.42.8e-26

Gene Ontology
AccessionOntologyName
GO:0000165PMAPK cascade
GO:0000977FRNA polymerase II regulatory region sequence-specific DNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0046983Fprotein dimerization activity
GO:0010022Pmeristem determinacy
GO:0010093Pspecification of floral organ identity
GO:0010214Pseed coat development
GO:0030154Pcell differentiation
GO:0045944Ppositive regulation of transcription from RNA polymerase II promoter
GO:0048283Pindeterminate inflorescence morphogenesis
GO:0048481Pplant ovule development
GO:0080155Pregulation of double fertilization forming a zygote and endosperm
GO:1903338Pregulation of cell wall organization or biogenesis

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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