result

Gene information

Detail information of AfisC2G04169

Location

Gene	Chr	Start	End	Strand
AfisC2G04169	chr2	683933843	683934923	+

Sequences

CDS

Protein

Gene

>AfisC2G04169
AAGTCTTTTAGAAATTATGCAGTGATGTGTAGCTAGGTTGGTTAAGTGTCACTTTAATTGTTCTACCCTTCAATCTTCTTCCTACTTAAGCCCCCCTTCTCTCTTACACACATTTCTCAGTACATTTCACTTCATCTTTTTTTTCCTCTCATCCTACATTTCAATTATTACAGTCTTTGTCTTCTTATTCTTTCTCTGTTCTTCCAACGTTGCAGCACCAAATCATCAAATCCAACACTACTTGTTTTAACAATTTCGAAGTGCATTATAGTTCGCATTCTCATCACCATCTCAGCCAAATCAAATGAATACTATAACAGTCAATTCCAAAAGCTTACCCGAATCCGAAGCAAGCAACAACTCAACAATCTCAACACCATCCTCTCCCAACCCGATAACCGCGACATCCAAACCCACTAACGACCCCAAGAAACCCGGTTCCAACAAACGGGCGCGCGACAACAGCAAGCATCCGATTTACAGAGGAGTTCGGATGCGGGCATGGGGCAAATGGGTATCCGAAATCCGCGAACCCAAAAAGAAGTCCCGCATTTGGCTAGGCACGTTTCCAAACCCGGAAATGGCGGCTAGGGCTCATGACGTGGCTGCATTGAGCATTAAGGGCAGCTCGGCCATTCTGAACTTTCCGGGCCTCGTCGGGTCCCTGCCCCGGCCCGTTAGCCTCTCGCCGCGGGACGTGCAAGCGGCCGCGGCAAAGGCGGCTGCAATGGAAGTCGGAGATGCCGTGGAGGAAAGTGGGCCGTCGGATGAGCTAGGAGAAATTGTGGAGTTGCCTAGATTGAATGGGAGTTTGTTTGATGGCGTGGGTTCGGGTTGCGAATTCGTTTACGATCCATGGGCTTGCCCGGTTGAATGCGGGTTCGGGTCGGATCAGTTTTGGGGTGGGCCCGACAGTTTTGAAGGTTTATTATGGGAGTGTTAGTTGATTTAGTTACGGATCATGATTATATACCTGTTTCTAGTAAATTGTGAAGTCATATTTCTTTTAGTGTTGAAATTAATATGATGTTTGAGTTTACATTATTTAAGAAAATTTGGCAGGAGAAACGATAATAAGATT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020246876.1	1.7e-62	dehydration-responsive element-binding protein 3-like
Swissprot	Q9LYD3.1	2.8e-41	Protein TINY 2
trEMBL	A0A8B7CAH5	6.0e-57	dehydration-responsive element-binding protein 3-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G11590.1	50.45	3e-46	181	TINY2	Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G04169	AT5G11590.1	224	66	7	26	212	21	236	50.45	3e-46	181
AfisC2G04169	AT5G25810.1	179	50	4	47	198	24	201	56.42	2e-44	175
AfisC2G04169	AT4G32800.1	184	46	2	45	184	5	188	51.09	3e-42	168

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	57	107	44.3	1.4e-11

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0009793	P	embryo development ending in seed dormancy
GO:0009825	P	multidimensional cell growth
GO:0009834	P	plant-type secondary cell wall biogenesis
GO:0009873	P	ethylene-activated signaling pathway
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network