result

Gene information

Detail information of AfisC2G04288

Location

Gene	Chr	Start	End	Strand
AfisC2G04288	chr2	710272348	710274253	+

Sequences

CDS

Protein

Gene

>AfisC2G04288
ATGTCGATCAACCACACATATCTATTCAAAGGCCCAATACTACTTGGCCCACAAATCTTAGTAACGTGTTACCCGAGCAACATACACTACATCCTAACCGTAAACTACAAAAACTACCCGAAAGGTAATGATTTTGCAGAGATATTTGACTTTCTTGGGAACGGAATATTTTGTGCGGACGGAGAATCTTGGGTTACGCAACGGAAGTTGGCACAAGCATTGATGGTGAGTCGTGGGTATAAAGGTTTTGTGTTGAGGACAACTAGTGAAATTACTAAAGGGAGGTTGGTGCCCATTTTAGATAGATGGGTGGAGTCGAGCGAGGTGGTTGATCTTGAAAAGGTGTTTAAGAGGACCACTTTTGATATTACTTGCATTTCTTCTTTTGGAGCGGATTTGGGAGCTTTGTCTGCCGAGTTTCCTATTGTCGAATTTTCAGATGCGGTTGATGCTGCATGGCAGGTACATTATTACAAGTTTTAGATTGTTTGTTTACGTTGGCTACTTTCATTCCTCTCACATTTTCGAATTTGTTAGATGTGTAAAAACAACTTGCTTAGATGATTGATCAAATTTCGTATTTATGTGGATCATAATTTTTAATAAATGAAGGATTCAACCAAAAGCATGTATTTAAGTGGACAAAATATTTAAAGTTTTGAATGATTTGAGTGGAAATTTTGATAAACATTAAGTAGTGGAAAAGAATTTTGAAATTGTAGAAAAAATCAAATGAAAATTTTGACCATAGATAAAGAGAAAGTAACTGAAAATTGTGAAGATATAAAAGACTTAAATGAAAATATGCTAGGAGAGCTAAGGAGACCAAAACAAAAGCATTCGTTTTACTATTATTTATTATATTGGTATTTTCACTAACTTATAGTGAATGATGAGACATTCGTAAAATATATACTCGGTAAAATATCACCTTTCACTATCTATCGATATTCTAGCGGACAATATTTTACAAAGAACGTCTCATCTGAACAAATAAACAATAAACCCGAGAACCAGTCTCATACTATAGTATACTTTTTGCTACCTTTAACTAATATAATAATGGTTTCAGGCTACTGTGTTTCGACAACTGGTTCCTATGAGAGTCTGGAAGCTCTTCAGGCTACTCAACTTAGGAGAAGAAAAAAAGCTAGCAAACTCTGTACCAGTAATAGATAACTTCATAATGCAACAAATATCAAAGAGAAGGGATGAGCTTCCAAAAAGATCAACCACATCTTCAACAGAAGCAAACGACCTACTAACTTCCTACATAGCTCGATCAGACGAATTTGACGATAAATTCCTTAGAGATACTGCACTAACCCTACTCATCGCAGGAAAAGATGCGTTTGGGGTAACTCTAACATGGCTCTTCTGTATGCTCTATAAAAACCCTAGAGTCGAGGAAAAAATCCTAGCAGAGCTTACAAGCGGAAAAGATCTAAACTCGATGGTTTACTTACACGCAACCCTATGTGAAGTCATGAGGCTCTACCCTCCAGTAGCATTCGAGCGCAAAGAGGTGATGGAATCTGATGAACTGCCAAGTGGACATAAAATAGAGCCTAAAACGTCGGTGCTTATACCAATGTATGCAATGGGAAGAATGGAGTCTATATGGGGAAAAGACTGCTTGGAGTTTAAACCAGAAAGATGGATCGGGGAAACTGGGAATGTCAGGCATGTCCCATCTTACAAGTTTCCAGTGTTCAACGCAGGGCCCAGGAGTTGTATAGGGAAGGAGATAGGGTTGACTCAGTTGAAGATGGTGGCAGCTGAATTGATACCAAGGTTTAAAGTGGAGGTGGTTAATGTGGAGGAGGTGGTGCCTGAAAATTCAGTTTTTATGGGTACCAGGAATGGGATGAGAGTCAAAGTTAAGAAGAGGGTGGTGGTTTGTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010911437.1	5.2e-114	noroxomaritidine synthase
Swissprot	A0A140IL90.1	4.2e-100	Cytochrome P450 96T1
trEMBL	A0A8K0N495	5.2e-116	Putative Noroxomaritidine synthase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G23180.1	42.09	4e-107	385	CYP96A1	cytochrome P450, family 96, subfamily A, polypeptide 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G04288	AT2G23180.1	449	234	5	4	427	65	512	42.09	4e-107	385
AfisC2G04288	AT4G39490.1	456	238	2	4	430	64	519	41.45	6e-105	377
AfisC2G04288	AT2G21910.1	448	244	4	4	431	63	510	41.07	4e-102	368

Ortholog group

Species	Genes
Allium cepa	g32862.t1
Allium fistulosum	AfisC2G04288
Allium sativum	Asa5G00004.1; Asa6G01913.1; Asa6G01914.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	32	411	178.9	1.4e-52

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0006952	P	defense response
GO:0005783	C	endoplasmic reticulum
GO:0055114	P	oxidation-reduction process
GO:0010025	P	wax biosynthetic process
GO:0010345	P	suberin biosynthetic process
GO:0016709	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0018685	F	alkane 1-monooxygenase activity
GO:0035336	P	long-chain fatty-acyl-CoA metabolic process
GO:0042761	P	very long-chain fatty acid biosynthetic process
GO:0048437	P	floral organ development
GO:0048438	P	floral whorl development
GO:0048827	P	phyllome development
GO:0080133	F	midchain alkane hydroxylase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network