result

Gene information

Detail information of AfisC2G04408

Location

Gene	Chr	Start	End	Strand
AfisC2G04408	chr2	725396976	725399333	-

Sequences

CDS

>AfisC2G04408
ATGTCGAAGTTGCTAGGAGAAATTATAGGAGGGACTGCAGGAGCATTAGCGTTGTTCTTGATTCTTATTGGATGTCTTTGGTTTTACTTCTTGAATATCAAAGCTTCTAGAAACAAAAATTCGGACGCAGGTTCATCGAATCAATCTACTTTTGTTGGAAGTAATGGAGATGTTCAGCTGACATTTGCAAAAGGAGCAAGAAATTTCACGCTCGAAGAGTTAGAACAAGCAACAAAAAACTTTAGTGACAACAATTTTGTTGGAGTAGGAAGTTTTGGGTTGGTATATAAAGGACTGCTTTTAGATGGAACCGTTGTAGCAATTAAGAAGAGACAAGGTTCTCCAAAGCAAGAATTTGTCGAAGAGGTAAAGTGTTTATCAACATTATGGCATCGGAACATAGTCACACTTATTGGTTATTGCCAGGAAAACTTTTTACAACTGCTAGTATATGAATACGTACCAAATGGAAGTGTTTCCAGTCATTTGTATGATAAAGGTCAACATTCAAGCACCAGGCTTGAATTTAAACAGAGGCTTTCTGTAGCTATAGGAGCAGCTAAAGGTTTATCATATATTCATAGCCAAATACCAATTCAAGTGCATAATGGTTTCAAAACCCGTAATGTATTGGTCGATGAAAGTTTTATTGCAAAAGTTGCGGATGCTGGCATGGTCAAATTACTTCAAAGAATTGAAGGCAATATTGGTTCTTCCCAAGACCAAATTTACCATGATCCAGAGGTCGGAGAAACAAATGATGTGTACAGTTTTGGAATTTTTCTTTTAGAGCTCATAACTGGTCGGGAAGTTGAGAAAAATCAAAGCTCGTCTTACTGGGTGGAAACTAATCGAGATTCTACAGAATTCATTGATCAACGACTTGCTACAAATTTTACATCTGAAGGAATGAAAGAACTTATCGACTTGACCGTTAGATGCCTAAGTTCAAATTACAAAGAAAGACCGAAACTGGAGATGGTTGTAAAAGAGCTTGATCGAATTTTAGATGTAGAGATGACGCTGACTACAGTAATGGGTGACAGTACAGCTATAGTTACTCTTGGTAGCCAGTTGTTTTCTTCCTGA

Protein

Gene

>AfisC2G04408
TTTACTTTACATAATGCCACTCTGTTTATATATCTTTTTATAAATTTTACAACCCTTTTAATCATTAAGATGTTGATGATTGTGAGGTAAATATATAGGTTTATAAATACTCATCAGTTGCTTCAGTTTAATTTTTCTTTCCTATTTCGACACAAGTACAAGATACTTTGTTTGAATAAGGATCAAAGAAGGGTGCCTTGAATTTTCAGGTTCAATGTGAATAGATTCTCAATGCGAAATTAAGAGAAGGGAATGTCGAAGTTGCTAGGAGAAATTATAGGAGGGACTGCAGGAGCATTAGCGTTGTTCTTGATTCTTATTGGATGTCTTTGGTTTTACTTCTTGAATATCAAAGCTTCTAGAAACAAAAATTCGGACGCAGGTTCATCGAATCAATCTACTTTTGGTAAAAATGTCTTACTATGTTTATGGTTTCTACTTTAGGAATTTCCAAATGTATAGTGATAACTTTGTTTACAGTTGGAAGTAATGGAGATGTTCAGCTGACATTTGCAAAAGGAGCAAGAAATTTCACGCTCGAAGAGTTAGAACAAGCAACAAAAAACTTTAGTGACAACAATTTTGTTGGAGTAGGAAGTTTTGGGTTGGTATATAAAGGACTGCTTTTAGATGGAACCGTTGTAGCAATTAAGAAGAGACAAGGTTCTCCAAAGCAAGAATTTGTCGAAGAGGTATATTTATTTTTTTGCAAAAACAAAAACAAATTATCATATGTTATAACACAAAAATTACCAAAATAACCCTAAACTCGCCCCCAAATATTGGAGGAGAGTCAAGGATATATCATTAATATTATGTGCTATAACTTAGGTAAATATAACATGGATTGGTGTACCTCATTTTTCTTTTAGAAAGGAAATGATCATCCTGCAGACAGACATATATGATAGTTTTCTTATTTCAAAAAGTATACCGTCATTTTATTGCAATGATATGTGTGTACACATGATGATACCTTTATTCACCAAACTAAACTCTGAGTATGAAGGAAAAAAATTGTTAAAAAAAGGAAAGAAAAAGAAAAGGAAAACAATAAAAAAAAAAAATTCCATTGTTGGACTGTTGAATTTGATGGGTGTCGTTGTGACATATATCAGTAAAAACCATAATGCACGGGTAGTACTATTCTGTGTTACTAACGAATAGTAATAATCAAGCAGGTAAAGTGTTTATCAACATTATGGCATCGGAACATAGTCACACTTATTGGTTATTGCCAGGAAAACTTTTTACAACTGCTAGTATATGAATACGTACCAAATGGAAGTGTTTCCAGTCATTTGTATGGTAAGTTTTCAGTTATCTTTGCTAAACTAATGACTGTAATTTTAGATAGTATTGTGACGCTGTGCGCTTTTTCAACAGATAAAGGTCAACATTCAAGCACCAGGCTTGAATTTAAACAGAGGCTTTCTGTAGCTATAGGAGCAGCTAAAGGTAATGAACATATTAAAGTAGAGCTGTATATGTGTTATAACATAGAAAACTCTCTTTGTCATAACACAGATTCATTTAATCTGTTATTCAAATATATGCATTCTATGTTTCAGGTTTATCATATATTCATAGCCAAATACCAATTCAAGTGCATAATGGTTTCAAAACCCGTAATGTATTGGTCGATGAAAGTTTTATTGCAAAAGTTGCGGATGCTGGCATGGTCAAATTACTTCAAAGAATTGAAGGCAATATTGGTTCTTCCCAAGACCAAATTTACCATGATCCAGAGTACGAATTATTCTATTATTACCTGGTGATTTTAGATGCATTACAAATTGAGTAAAATTTGGTTTCCTTTAGGGTCGGAGAAACAAATGATGTGTACAGTTTTGGAATTTTTCTTTTAGAGCTCATAACTGGTCGGGAAGTTGAGAAAAATCAAAGCTCGTCTTACTGGGTACAATCTTTTACTTTATAATAATTATTGCGTGTCCTACTAAATAGATGTTCCCGTGGTCTTGAGCTTCAGTAGTACCTTGTATCGTACAAGTAATTCCTTATATTATGACAAATAAATATTATTTTGTAGAATTTATTCATGTAGTAATCATAATTTTATAGCTGATGTTTACTTAATATGCATACAAGGTGGAAACTAATCGAGATTCTACAGAATTCATTGATCAACGACTTGCTACAAATTTTACATCTGAAGGAATGAAAGAACTTATCGACTTGACCGTTAGATGCCTAAGTTCAAATTACAAAGAAAGACCGAAACTGGAGATGGTTGTAAAAGAGCTTGATCGAATTTTAGATGTAGAGATGACGCTGACTACAGTAATGGGTGACAGTACAGCTATAGTTACTCTTGGTAGCCAGTTGTTTTCTTCCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020273067.1	4.8e-121	probable receptor-like protein kinase At1g30570 isoform X1
Swissprot	Q9LT96.1	1.1e-45	Probable leucine-rich repeat receptor-like protein kinase At5g49770
trEMBL	A0A5P1EF31	3.5e-121	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G26700.1	50.41	4e-93	338		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G04408	AT3G26700.1	367	155	9	16	362	19	378	50.41	4e-93	338
AfisC2G04408	AT1G70460.1	336	176	10	43	351	325	646	35.42	9e-47	184
AfisC2G04408	AT5G38560.1	294	150	8	69	333	327	615	37.41	1e-46	184

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	87	332	117.9	4e-34

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0007165	P	signal transduction
GO:0009507	C	chloroplast
GO:0009741	P	response to brassinosteroid
GO:0009826	P	unidimensional cell growth
GO:0019901	F	protein kinase binding
GO:0032501	P	multicellular organismal process
GO:0044425	C	membrane part
GO:0044702	P	single organism reproductive process
GO:0044703	P	multi-organism reproductive process
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network