Detail information of AfisC2G04430


Location
GeneChrStartEndStrand
AfisC2G04430chr2728783512728789850-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020274071.12.4e-110auxin response factor 23-like isoform X3
SwissprotQ5JK20.12.2e-95OsARF2
trEMBLA0A5P1EC092.4e-107Auxin response factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G62000.145.326e-97 351ARF1-BP;ARF2;HSS;ORE14auxin response factor 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag217873.t1; g32989.t1
Allium fistulosumAfisC2G04430
Allium sativumAsa2G00230.1; Asa6G02049.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family13623752.33.7e-14
PF06507.10Auxin_respFamily26334477.08.7e-22
PF02309.13AUX_IAAFamily42045927.32.6e-06

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0006351Ptranscription, DNA-templated
GO:0043565Fsequence-specific DNA binding
GO:0050794Pregulation of cellular process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14486K14486, ARF; auxin response factorEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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