result

Gene information

Detail information of AfisC2G04461

Location

Gene	Chr	Start	End	Strand
AfisC2G04461	chr2	734822438	734824252	-

Sequences

CDS

Protein

Gene

>AfisC2G04461
ACTACACGTCGTTCTTATTCGCTTTACTCATTTCTTTTGTTTATTTATGAAAATTGCCGTCTCATTTGTCTTTTTGTAGGATGAGGACATCTTCTTATTTTTTAAAAATTAAATACTAAATTTCATATTTCGCCTGCCTATAAATGCTTAAGCTGAAGTTTGATATGTACAAATCTAGTGGTGCAACAACTGTGTAATCATTCGAGAAAATGTGTGGTGGGGCGATTATTTCTGAGTTTATCGAGTTCAAAGGAGCTCATAAATTGGGGAAAAGGGATCTTTGGTTGTCTGAATTTGAGAGTCTTGATGAATTTTCTGAGGCTAATGAATCGACTCCTCAAGCGCAACAAGGTGAGCTAATTTGTGCTCTAGGATTGTTTCTCAAAATAAATTTCCTATATTTCTTCATGGTTTATATGAAGTAGTTGTTCATTTTGTGTGGTTTTTTGTTAGTTATCCACAACATCTAAGAGGTAAATTTGTTTGATTTGTAAGTTAAAGCGCAAAGTAACTGGATACAATTATTAGAAAACATATGTATTAGATCTTGTTAAACTAGTTGATCATAGTCCTTACCTGTGCTAGAACCAAAACTACTAAAATGTGTACAGATTAAAATGGATAGAAATTGGAATTTTCTTTGCATTGGTATCTGTTTTTAAGTTTATGATAAATAAATTAAAAAAACTATTGATTGGTTAGATCTACCATTAACAAAGAGAACTATTTGTATAACGGATGGTTTAGTTACTACTACATTCGTTTTGAGATTTATCCTTCCTTCAGTCACATGTTTACTTGTAAAACATTGCAAAACTTGTGCAAGTGCATATTAATACATTAGTATGGATTAAAAAGAAATAGTTGTGAAATATTAGCTGTAAGCCTCAACTACAAATATCCATGCATGCCGTATAGATCCCAGATGGTAATTTATCAAAACCCACTTTAACTTTGATTATCCAAGCTTATCAACTACAAATATTAGCTGTAAGCAGTAAAATTAAGCGAATCCAATTAATAAAAATCATTAAATTCATGAGTTGATAGTACAAGTTATTAGAAGAATCAGGAGGAATTTATTTGATGTAGATTCAATTAGAATAATCAACCCAACTCAAACTGTATTCCAACACAAGTGAAAATTGCACCTGTTTTATTTAGGCCGAGGGAAGAAGGCCAAAAGCTCATCTGGATCCAACAACATGGCAGAAAACAAAGCACGAAAAAACGTGTACAGAGGAATCAGGCGCCGTCCATGGGGAAAATGGGCGGCTGAGATTCGGGATCCACGAAAAGGGACTCGTGTCTGGCTAGGCACCTACAACACAGCTGAAGAAGCAGCCAGAGCGTATGATGCAGCAGCGCGTGAAATACGTGGAGCCAAAGCGAAGCTCAACTTTCCAGATGAGGTGCCAGCTCAGAAGAAGCATAAGCTTGAAACCGATCCTGAAGTTGAACCAGAACTGGAAGGTAGCTCAGCTTCGAACTCGGCTTATGAGGCTGAGCTCAAGGAGCAGATCTTTAGCTTGGAATCGCTGCTCGGCTTGGAACATGAGTCAGACGAGTCTTCTTCTAATGAGTTTGGGACTGTCAATGGGATTGGGATTGATGTTTGGGATCAATTGATTCGCTTTTGAACTACCTACTTAGCTATTTCAACTCCATGAATTATGTTTTTGGTTAAATAAAAAAGGAACGTTGTAAATATTTTTAATTGTCGAACCTTGCTGAAGTTTTAATTTTATGTGAGCTTTCGTGTTTTAGCTATTTTTTTCTTTATGTTGGTAACTTGGCTATGAAATTGTATTGAGC

Functional annotation

Database	accession number	e-value	annotation
nr	KAE8708818.1	6.0e-36	ERF071 protein
Swissprot	P42736.2	1.5e-28	Protein RELATED TO APETALA2 3
trEMBL	A0A6A3AYR7	4.3e-36	ERF071 protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G16770.1	39.59	8e-34	140	ATEBP;EBP;ERF72;RAP2.3	ethylene-responsive element binding protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G04461	AT3G16770.1	245	105	8	1	203	1	244	39.59	8e-34	140
AfisC2G04461	AT1G72360.2	153	71	2	1	146	1	150	47.06	4e-31	130
AfisC2G04461	AT1G72360.3	162	58	2	1	146	1	148	45.68	2e-30	128

Ortholog group

Species	Genes
Allium cepa	g284185.t1
Allium fistulosum	AfisC2G04461
Allium sativum	Asa6G02082.1
Arabidopsis thaliana
Oryza sativa	LOC_Os05g29810.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	71	120	55.2	5.7e-15

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0001944	P	vasculature development
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0050832	P	defense response to fungus
GO:0005730	C	nucleolus
GO:0009414	P	response to water deprivation
GO:0009651	P	response to salt stress
GO:0009749	P	response to glucose
GO:0009751	P	response to salicylic acid
GO:0009788	P	negative regulation of abscisic acid-activated signaling pathway
GO:0009864	P	induced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010105	P	negative regulation of ethylene-activated signaling pathway
GO:0010200	P	response to chitin
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0016604	C	nuclear body
GO:0019760	P	glucosinolate metabolic process
GO:0034059	P	response to anoxia
GO:0043565	F	sequence-specific DNA binding
GO:0051301	P	cell division
GO:0070483	P	detection of hypoxia
GO:0071456	P	cellular response to hypoxia
GO:0071497	P	cellular response to freezing

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network