Detail information of AfisC2G04726


Location
GeneChrStartEndStrand
AfisC2G04726chr2781583197781600776+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020276448.17.5e-236LOW QUALITY PROTEIN: squamosa promoter-binding-like protein 9
SwissprotQ6I576.17.7e-161Squamosa promoter-binding-like protein 9
trEMBLA0A5P1EDW81.2e-224SBP-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G18830.339.492e-156 550ATSPL7;SPL7squamosa promoter binding protein-like 7

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag9938.t1
Allium fistulosumAfisC2G04726
Allium sativumAsa6G02307.1
Arabidopsis thalianaAT5G18830.1; AT5G18830.2; AT5G18830.3
Oryza sativaLOC_Os05g33810.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03110.11SBPDomain11619091.82e-26

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0010321Pregulation of vegetative phase change

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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