result

Gene information

Detail information of AfisC2G05056

Location

Gene	Chr	Start	End	Strand
AfisC2G05056	chr2	833774796	833776889	+

Sequences

CDS

Protein

Gene

>AfisC2G05056
ATGAAAGGGATGCCAGAAGGTATTCTCTGAGCAAATTCATCATACTCAGAACCAAAAAACTATCTTACAGTATGCGGTCATAGAAGAATGTCCAGGTAACTGCAGTAAACTAAAGCACACCAATAATAATTTCTTTTGTATGCTAAAGCACATCAATAATAAGTTCAAAAGAACATCATGAGGATGTTGAAGCCACTCCTGTATCTGGATTTTCAAAATTATTTGATTATGATGGCCACCTAAAATGAACATTATACTAAACTAATCATCAATTTCTTCTACAACCATTGGTCAAAAACTGCATAAAAGATTTGCAAGTAAACTGCTTGAATTGTTCTTGTGCAGTAAAGAGGGTCTTGTCTAAATATTTGGTCTGGGAATGAACATGCATAAATAAAAAAAGTTTACAAATATATGTTACCATGTATACAATGCATGCAACATGAACTTGAAAGAAACAGATTTGCCTTGGGTGAGTATTTTGCCAATGTTCACAGTGGACAATTTTATAATATTTATGATTGTGAATCAATGTTCATGCAATTATGAGAAACGTAAGTTTGACATGATTTAAGAAACTATACACCCTTTCTAAAGAAATATAGCTTATGCAGCATAAATATATAACACCCTAGCAAGCTAGTTTATAATGTAAAGGATTAGTAACAACTTTATCCACTGTCATGTATACCCACACGGTATGTAAACTTTATCCACTGTCAATATTTTCACAAAACATTCATATATAAGCTATTTTAAATATGCAAGGCAAAACTTTACATTGCGATAGGACCAAAACAACTAAATTGTTATTTGTATACTGAAAAATAAATATTCAGGTGGAGCCATGGCCTGAGTTCTTTGTACGTAATCCAGGGCATCAATTCTCAAGTGTACACATGAGAACACTATAAATTAATTATGTTAATATTGCAACATGTATTAACTATTAACTATGTTTCTAATATTTTTACTGTTAAATATGCAGGTATTGAATCATTTTCAAAACTAGGAGATTCTATTTATTTTGAAGAGATGGGGAAAACCCCTACTTTGTACATTATACAATTCATATCAAGTTCATTTACTTGGAATTCTGGAGGTATTACAATATCACATAAAATCGAGCCAATTAGTTCATCAGAACCATATCTTCGATTGTCCTTGTCAATTTCGTCTAATCGGGTATATTTATCAATCCATTTATATATTTGAATCCTATAAATAAATAATTGGACAATTTGTTTAATACCTGTATTGCATTTATAAAGTCGAGTACTCAAGCTTCAACCATCAACCTGAGAATACCATTCTGGACTTCTTCGAGTGGTGCAAACTCAACGTTCAACTCTCAAACTTTGACAATGCCATCACCTGGTAAGTAAATTATTTAGTTTCAGTTTGTCTGCTTGCATACATGTACATGTGCATATCCAAATAAGTTAATAACAATATCATTGCTCAAAGCAGTTTCATTTCCAAATACTACATCAGCTTGTATAAATTCCTTTGTATTCATTGATCATCATGTCTCAACTGATCAAGAAATCCAAATTCTCAGCTACATGCAATCGGTTGAATCAATACATAAAAGAGAAGAAATCCTTTCCTGAATATATTATTGGAGGACTCAACATCAATACCGTATTATCTCAACAGCCAACTCAAGGTATTTTTATTGATCATTACCTTATTTTGATTCGCTCTACCATCTTTTTTTTAACACTAGCAACGTAATGAAGATTGTTGTTTTGATTTACAGATTCAGATGCAACTCTGGACTTGTTTCCCGGAGCTGAATTGAACCAAACTTATACTACAAGCCCTGAAACCAAACAGTTAACAATATTATACAATGGAGAAGTTGTAAATTTCCACAATTTCGATGCTGAGAAGGCAGAAGAGATCATTGCTTTTGCCACTTCAATTGCTACATTGAAGAAAGCTGTTTTGGATATCTCAATGCCAATGGCTAGAAGAACGTCTCTACAAAGATTTCTTCAGAAAAGAAAAGATAAGATTAATTCAAATGCACCATATTCATCAAAGCAAGCTGAATATGATGAGAAGTCATGGCTTCAGTTAGGCTTATAA

Functional annotation

Database	accession number	e-value	annotation
nr	KAB5572926.1	3.3e-28	hypothetical protein DKX38_000120
Swissprot	A2XD79.1	8.9e-10	Jasmonate ZIM domain-containing protein 11
trEMBL	A0A5N5P2F4	2.4e-28	GH43_C2 domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G12960.1	52.48	2e-26	116		Putative glycosyl hydrolase of unknown function (DUF1680)

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G05056	AT5G12960.1	101	47	1	7	106	488	588	52.48	2e-26	116
AfisC2G05056	AT5G12950.1	101	47	1	7	106	484	584	52.48	2e-26	115
AfisC2G05056	AT1G19180.1	226	71	10	109	252	26	250	31.86	7e-14	74.3

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07944.9	Glyco_hydro_127	Family	5	99	32.2	3.7e-08
PF06200.11	tify	Domain	164	196	38.4	5.1e-10
PF09425.7	CCT_2	Motif	212	237	40.0	2.3e-10

Gene Ontology

Accession	Ontology	Name
GO:0006950	P	response to stress
GO:0044699	P	single-organism process
GO:0050794	P	regulation of cellular process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13464	JAZ; jasmonate ZIM domain-containing protein	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network