result

Gene information

Detail information of AfisC2G05172

Location

Gene	Chr	Start	End	Strand
AfisC2G05172	chr2	855301293	855302338	-

Sequences

CDS

Protein

Gene

>AfisC2G05172
ATGTTTGCCGCTTCAGGTTTAAAATTGTCATCTACTATGGGTTTTGTAATTATGTCTTTCCATCTGTGTAAGTCTCAGATCCAATATCCAGTCGTGAAATCTATGATGAGATTTTTAGCATATGAAATTTTAGAAACAATATTATATCATCATTTGGATTAATTTTTTCTTTTATTTGAAGTTGGAAATACATGTTTTATATTTCAAGTTCAGTACATTTAGATAAAATGGGATCTGAATGAATGTTATGGGGTACTTGATTCTCATGTTCTTGCTTGAATTAGTTACTTTTATCTTTCTAAATTTATGTAGTTGTGCGTGAAACGTTTGTAAACAAGATTTGTGCTGTTTGTTGCATGAATTAAAAATATATGTACATTTTCCGGTTGCATTCATATTTCTAATACTCATGTGATTTATGAATATGTGTTATATAACTTCGCCGTATGCATGCAATCGTGTTTGAGTATTTTAACCTGTACATTACATAACTGTGTTACTACGATTCAGTTTTACATAACATAAAAAATCTCTTAAACAACATTTTTAACTCCATCATCAAATTATTACTGATGCCGGTCTCAAGCCCGGAACAAGGAGGAGAGAAAATGATTAAAATAACTATACTTCGTAGTTACAATTTACTTTCATATAGTATGCGAGCTACAATATGTCCTACTGTCTCCTTCTCCTCCAAAAATGCTACCTTATCTACTTCAGCTTAACTATTATATCTATTGAAGAAAAAATTCTGCATACTTATTACTTTTCTTTTTGGCTACTTACGATCGGTCTAATTTACAGCATATTTGGTGCCTGAACTGACCCGGACTAGGAAGGCGACGACCAGCTCGGACGTGTTTGCGTTTGGGGCGTTGGTGTTGGAAATAGTGTGCAGGTGGAGGCCCATAGAGCCCAAGGCGGACCCCGATGAGTTAGTGCTGGTGGATTGGGTATGGGAGAAGTACAGTACTGGTAAGTGGATGGAGGCGCTGGACCCGAAGATGGACGGGTGCAAGTTGGTGGAGGCGGAGGTGGCGATGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	THU46276.1	5.0e-23	hypothetical protein C4D60_Mb09t03230
Swissprot	Q9M2S4.1	4.0e-17	L-type lectin-domain containing receptor kinase S.4
trEMBL	A0A4V4H2Z9	3.6e-23	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G55550.1	49.38	2e-18	87.0	LecRK-S.4	Concanavalin A-like lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G05172	AT3G55550.1	81	40	1	22	102	512	591	49.38	2e-18	87.0
AfisC2G05172	AT1G70130.1	69	35	0	22	90	499	567	49.28	1e-16	81.6
AfisC2G05172	AT1G70110.1	81	40	1	22	102	509	588	49.38	3e-16	80.1

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	21	56	22.4	5.8e-05

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000166	F	nucleotide binding
GO:0005515	F	protein binding
GO:0002229	P	defense response to oomycetes
GO:0050832	P	defense response to fungus
GO:0004674	F	protein serine/threonine kinase activity
GO:0030246	F	carbohydrate binding
GO:0009555	P	pollen development
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009751	P	response to salicylic acid
GO:0009845	P	seed germination
GO:0046777	P	protein autophosphorylation
GO:0052033	P	pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response
GO:0090333	P	regulation of stomatal closure
GO:1900425	P	negative regulation of defense response to bacterium

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network