Detail information of AfisC2G05227


Location
GeneChrStartEndStrand
AfisC2G05227chr2863777661863799258+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020247360.11.2e-204serine/threonine-protein kinase ATG1a isoform X1
SwissprotQ94C95.14.9e-142Autophagy-related protein 1a
trEMBLA0A5P1E1L58.9e-205Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G61960.144.462e-150 529Protein kinase superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag258636.t1; g258637.t1
Allium fistulosumAfisC2G05227
Allium sativumAsa6G02740.1
Arabidopsis thalianaAT3G61960.1; AT3G61960.2
Oryza sativaLOC_Os03g02980.1; LOC_Os03g02980.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain18273246.62.5e-73

Gene Ontology
AccessionOntologyName
GO:0000045Pautophagosome assembly
GO:0000166Fnucleotide binding
GO:0005515Fprotein binding
GO:0000407Cpre-autophagosomal structure
GO:0044409Pentry into host
GO:0016020Cmembrane
GO:0004674Fprotein serine/threonine kinase activity
GO:0005776Cautophagosome
GO:0006468Pprotein phosphorylation
GO:0048102Pautophagic cell death
GO:0009306Pprotein secretion
GO:0009405Ppathogenesis
GO:0009847Pspore germination
GO:0032258PCVT pathway
GO:0043936Pasexual sporulation resulting in formation of a cellular spore

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08269ULK2, ATG1; serine/threonine-protein kinase ULK2EC:2.7.11.1 mTOR signaling pathwayko04150
Autophagy - animalko04140
Autophagy - yeastko04138
Autophagy - otherko04136
Mitophagy - yeastko04139
Longevity regulating pathway - wormko04212
K11912ppkA; serine/threonine-protein kinase PpkAEC:2.7.11.1 Bacterial secretion systemko03070
Biofilm formation - Pseudomonas aeruginosako02025

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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