Detail information of AfisC2G05304


Location
GeneChrStartEndStrand
AfisC2G05304chr2877168713877177844+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020271978.14.5e-141probable inactive histone-lysine N-methyltransferase SUVR1 isoform X1
SwissprotQ8W595.28.5e-113Suppressor of variegation 3-9-related protein 4
trEMBLA0A804HTR14.1e-144SET domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G04380.154.552e-113 406SDG31;SUVR4SET-domain containing protein lysine methyltransferase family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag363906.t1
Allium fistulosumAfisC2G05304
Allium sativumAsa5G03254.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF10440.6WIYLDDomain75967.94.2e-19
PF05033.13Pre-SETFamily33147948.87.9e-13
PF00856.25SETFamily49962163.42.9e-17

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005634Cnucleus
GO:0018024Fhistone-lysine N-methyltransferase activity
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0034968Phistone lysine methylation
GO:0050896Presponse to stimulus
GO:0090304Pnucleic acid metabolic process
GO:2000112Pregulation of cellular macromolecule biosynthetic process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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