Detail information of AfisC2G05580


Location
GeneChrStartEndStrand
AfisC2G05580chr2921494119921499100+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020252675.13.7e-43LOW QUALITY PROTEIN: PHD finger protein ALFIN-LIKE 2-like
SwissprotB8AMA8.21.9e-33PHD finger protein ALFIN-LIKE 3
trEMBLA0A5P1FJD92.6e-43PHD-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G05610.157.723e-31 131AL1alfin-like 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00628.26PHDDomain13918336.23.7e-09

Gene Ontology
AccessionOntologyName
GO:0005829Ccytosol
GO:0046872Fmetal ion binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0044212Ftranscription regulatory region DNA binding
GO:0045727Ppositive regulation of translation
GO:0035064Fmethylated histone binding
GO:0043565Fsequence-specific DNA binding
GO:0071472Pcellular response to salt stress

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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