Gene information

Detail information of AfisC2G05669

Location

Gene	Chr	Start	End	Strand
AfisC2G05669	chr2	935577696	935578444	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241926.1	1.4e-56	homeobox-leucine zipper protein HAT4-like isoform X2
Swissprot	Q05466.1	3.8e-38	Homeodomain-leucine zipper protein HAT4
trEMBL	A0A2I0A3Y1	2.3e-40	Homeobox-leucine zipper protein HAT3

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G16780.1	55.09	1e-40	162	ATHB-2;ATHB2;HAT4;HB-2	homeobox protein 2

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G05669	AT4G16780.1	167	55	4	58	205	101	266	55.09	1e-40	162
AfisC2G05669	AT4G17460.1	272	94	10	1	209	1	271	41.91	1e-39	159
AfisC2G05669	AT3G60390.1	187	59	5	35	191	88	273	51.87	3e-39	158

Ortholog group

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00046.26	Homeobox	Domain	80	132	58.1	5.1e-16
PF02183.15	HALZ	Family	134	168	36.6	3.6e-09

Gene Ontology

Accession	Ontology	Name
GO:0000123	C	histone acetyltransferase complex
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0008283	P	cell proliferation
GO:0009506	C	plasmodesma
GO:0009641	P	shade avoidance
GO:0009733	P	response to auxin
GO:0009735	P	response to cytokinin
GO:0009826	P	unidimensional cell growth
GO:0010015	P	root morphogenesis
GO:0010016	P	shoot system morphogenesis
GO:0010017	P	red or far-red light signaling pathway
GO:0010218	P	response to far red light
GO:0010321	P	regulation of vegetative phase change
GO:0010484	F	H3 histone acetyltransferase activity
GO:0010582	P	floral meristem determinacy
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0016573	P	histone acetylation
GO:0042803	F	protein homodimerization activity
GO:0043565	F	sequence-specific DNA binding
GO:0043621	F	protein self-association
GO:0048467	P	gynoecium development
GO:0080127	P	fruit septum development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09338	HD-ZIP; homeobox-leucine zipper protein	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network