Detail information of AfisC2G05821
| Gene | Chr | Start | End | Strand |
|---|---|---|---|---|
| AfisC2G05821 | chr2 | 960010129 | 960027421 | + |
| CDS |
| Protein |
| Gene |
| Database | accession number | e-value | annotation |
|---|---|---|---|
| nr | XP_010906762.1 | 1.5e-289 | origin of replication complex subunit 1 isoform X1 |
| Swissprot | Q5SMU7.1 | 1.3e-269 | Origin of replication complex subunit 1 |
| trEMBL | A0A6I9QD66 | 1.1e-289 | Origin recognition complex subunit 1 |
| TAIR id | % identity | e-value | bit score | gene aliases | Short description |
|---|---|---|---|---|---|
| AT4G14700.1 | 65.63 | 0.0 | 890 | ATORC1A;ORC1A | origin recognition complex 1 |
| Species | Genes |
|---|---|
| Allium cepa | g98590.t1 |
| Allium fistulosum | AfisC2G05821 |
| Allium sativum | Asa6G03360.1 |
| Arabidopsis thaliana | AT4G12620.1; AT4G14700.1 |
| Oryza sativa | LOC_Os06g08790.1 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|---|---|---|---|---|---|
| PF00628.26 | PHD | Domain | 130 | 175 | 34.5 | 1.2e-08 |
| PF01426.15 | BAH | Domain | 206 | 301 | 54.6 | 7.8e-15 |
| PF00004.26 | AAA | Domain | 431 | 575 | 76.8 | 1.8e-21 |
| Accession | Ontology | Name |
|---|---|---|
| GO:0005886 | C | plasma membrane |
| GO:0000082 | P | G1/S transition of mitotic cell cycle |
| GO:0005515 | F | protein binding |
| GO:0000784 | C | nuclear chromosome, telomeric region |
| GO:0003682 | F | chromatin binding |
| GO:0005524 | F | ATP binding |
| GO:0005664 | C | nuclear origin of replication recognition complex |
| GO:0005730 | C | nucleolus |
| GO:0006261 | P | DNA-dependent DNA replication |
| GO:0006355 | P | regulation of transcription, DNA-templated |
| GO:0008270 | F | zinc ion binding |
| GO:0009536 | C | plastid |
| GO:0009567 | P | double fertilization forming a zygote and endosperm |
| GO:0009744 | P | response to sucrose |
| GO:0010385 | F | double-stranded methylated DNA binding |
| GO:0032993 | C | protein-DNA complex |
| GO:0043933 | P | macromolecular complex subunit organization |
| GO:0044451 | C | nucleoplasm part |
| GO:0045934 | P | negative regulation of nucleobase-containing compound metabolic process |
| GO:0048661 | P | positive regulation of smooth muscle cell proliferation |
| GO:0070318 | P | positive regulation of G0 to G1 transition |
| GO:2000113 | P | negative regulation of cellular macromolecule biosynthetic process |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|---|---|---|---|
| K02603 | ORC1; origin recognition complex subunit 1 | EC:- | Cell cycle | ko04110 |
| Cell cycle - yeast | ko04111 | |||
| Meiosis - yeast | ko04113 |