Detail information of AfisC2G05881


Location
GeneChrStartEndStrand
AfisC2G05881chr2967121161967125933+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrQCT25558.14.3e-77APETALA1-like protein
SwissprotP0C5B1.16.5e-62RMADS211
trEMBLA0A4P8YVL73.1e-77APETALA1-like protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G69120.170.063e-61 230AGL7;AP1;AtAP1K-box region and MADS-box transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain105791.02.2e-26
PF01486.14K-boxFamily8416096.19.3e-28

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity
GO:0009908Pflower development
GO:0030154Pcell differentiation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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