result

Gene information

Detail information of AfisC2G06020

Location

Gene	Chr	Start	End	Strand
AfisC2G06020	chr2	985517913	985522326	-

Sequences

CDS

Protein

Gene

>AfisC2G06020
ATGAACTTCGGAGTCACCATCCCCGATGCCGACTTCATCACCATCGGTGAGCTAAACTCTAAGACTTTAAGTCTTATGAGTTTGCCAAAACGCCATCCACTTCAAAAAATCATTAGCTTCCAACAATGGGCGGCAAATCGAGCACAAGGGATTTCGCAACCCCATGAGACACATATAGGCTCCTCCTCCTCTCAACCTTCCCGTCAAATCAAGGAAGAAGAAGAAGATGACGAGATTCAATAGCTTCATGGTGACTTTCCTCCAAGGCAAGGTCTAGTCACTCTCTCTCGGAATCAAAGTAAGCTCAATCGACGATTGGACAACGTCGAGAAAAACGTCGTCAAGACCAATAAGAAGCCCAACTCCATCAAGGGTTTCTTAAATAATATTTGGGAGAAAATTTCCTGCACCAGCTCTACTTCTACAAGTATTGTCGAAAATTCCCCCACTCCTTTCACTTGGACTACATCCGAGGAGGAAGAATTCAATAGCGAGGAAGCTTAGTTTTTCTTAATTTTATCTTAGGTTTATGTATTTTCATTAAATTCCGTTGTTTGTTATGTTGTCAATGCATATCTTTTGTTTAAATATTTTGTCTGTTTTAATGTTGAATTAATTTTGTTTTTGTTGTTCTTTGTTAAGTAATATGCTGTTCAATTTCATTTACTTGTTGTTGGTTTAAATGCAAGTTATCTATGTTATCAAGTTTACTTCTTGTTGAATGTCAAATTAACTTATACTCATCCATAATACTATCATTTATCATGATTGCCAATTATTCCGTTTTGTCGATGACAAATCGTGAGAATTATAAGATGTTCGGCAGGTAGATCGTTTATTCAGGGGGAGTTACAATTGCTTTTATAAAATTTTATAATCTTGTAGACTTACATAGTTGTCATCATCAAAAAGGGGGAGAATGTTAGAACCTTGTATTTTGATGTTTTGATCGTGACAACTATATAAGTATATATTATATGAACTAATCATATTTGCAGGAGAAGATACTATTCTACTCGACAATAGATTGAAGACCAAGAATTCAAGAAAAGTTTTCAAATTTTATAAATGGTTTGTCTATAGTGTAGTTAGAAGTTAATCATTATTAATATCTCTCCTTAGTGGTATATGCTTGCACACATGGTTTTAAATTTAAATTAAAAATCATATACACACTATGAAAATTATTTATATAAAGTTCATAATCAAAAAGCTTTAAAAAAATATGGCAGAAAACATCATTTTTAGTCGACTAAATAGGTGATACCAGTCGACTGAAACATGCATAGGTGCACAAGTTTATTTGAAGGTTCAGTCGACTAAACCACCCCATTCAATCGACTGAACCAAGTATCTTTTCAAAAATAAAATTTAGAATTCGAAATTTTAAATATTCAGAAGACTGAAAATTTTACCTCAGTCGGCTGAATATTCATAACGGCTATTTTTCTGAATGGTCACCACTTTTTAACAAACAGAAACAACCCTTGATTCAAGAGTTGTTTTCGTATCTTTTGGCCATAACTTTTCACGAACAATTGTATATTTTAAACTCTATATATAGACTTGAATTCAGTTGTTTCTATAACTTAATTCTCTGATTCTTTTCTAATATTCTTGCTATCTAAAATTCTGCCATTTGCTTTCAAATCTGTTTCAAATCACTTGCACATTCAAGCACAAATTTATTTGTGATTAAAATAACTTCCAATCTTCACGAACTACACTATATACCACAAATAAGAATATTATAGGAAGGGTGTACTCTAAAGACTTATCCATGCTATCAAAAGAGCATAATCAGTCAAGAAAAATTTCTGTATTGTTGAAGTCCTGTTCGGTTGCTCAGGCACTAGAAGTCCTATTCAGTTGTCTAGGTGGTAGAAGTCATATTTAGTTGCTCGGGTAGTGTAATACCTGTTCCTCCGGGTTAAGTGAGGGTTACTAGTAGAATTCCAGAAGGAGTCTGGGACTGGATGTAGAATGGGAGTTCGAACTAGTAAAAAAATCCCTGGTATCATCACTACAAGAAAATCATTCTTTAATTGCAAGAATGAACAGCGTTGGGAAGCAAGGCGCTATTTCTCATTATTCGGATTTAAATAGTCACCGTATTCACGCTATCAATTGGGATCCAACGTTAATAGAATGAAAATAAGACACTTACATGGCAAAATATTTTCATTCCCTCTCATTAATCAAATTCCGACTTTCATGTCAAAACCCCTTTCTTCCTCAACTTCGCTCTAAATATCCATAATTTCCTCCTTTCTTCATGAATCCAACATCATCGAATTGATCTTCACGAATACAAAAATAAATCACGTACAATCAAGCTGGTAAAGCAATCGCTTTGGGCCACCTAAATCTTATGGCACCACCTTCAGCTCCTAGTATGTCAAACATGCAACCAAAAATGCAAAAAAAACTATCCTGATCCGTAGCCAAAAGGTAAAAGAAAAAAATCGCAATTGATTCAGATTCGCTACTCAGGAAAGGTTAGAGTAGTAGCACGCCTAGGCACAGCATGGCATGACTCCTAACTCGGACGGTGGTGGCGATTTGAATGCAACGACAACTAGGCGGTGTCACGGTGACTCGAATTAGATGTGAATCTAATTAGGTGGCCCACGGCTATGGGGACTCAAAGACTTCGGCTAATCAGACGGCAATAGGCAACTCTACAGTGTATAGATCTTCGATTGTTACTGGTTGCTACCTTGTTGAAAAGGACCAAAAGGTATTTAATTCATTGAGGGTTTTTGACATTTTTAAAATCCTGAACCAAATTTGATTGTGTAGACAAATTTGAGTGACATTGATCCAGGTAGTCATGTTTGGGTTGAAGATCCTAACATGGCTTGGATCAATGAAGAAGTTCTGGAAGTCAATGGTGACCAAATTAAAGTCAAATGTTCAAACGGAAAGGTTGTAAGTTACTAAGATTGGAGTTTTGAGTTGATCTTATGTGTTGTTTGATCTTTGTAAATATGTGTTTCGGATAATGCTGCCATGTTTGGTAAGATCATGATAATATTCAGTATACCGTTATTCAAGATTGTATAAATATGTGAAAATGGTCATTTGATAATTATGTATAAGACAAAAATAGCTAAACCAATACTGTTCATTTGAAAATGGTCATTTGATAATGAATATCAGATCTTATTCTTGCAAACATGGGTTCAAAAATCATTATGTGTGATAACAATTTCTCTCTTCTATTTAGTTGGGAAGGATAAATGTATCCTTTATTTTAGTGTGTATAGACACTAATTGGATTCATCATGGTGGTCCATGCATTGTTCTTGTAGTGAATTCATATCGCGTATTGTTCAGTAAGTAATTATACAATAAAGTATTTTTGAATCATGATTAATATAAGTATCATCAAAAAAGTATGACGCATTAGATTATCGCCAAAATTATGATATGTTGACATGTCAATACTGGATAAATTAAATGCTTATGAGAATTCTCTAATTTTTAATAAAACAAATGTATGCTTCATAGTGAAATATTTTAATGATATTATAATAAACTTGGTCATAAAATCCCTAATCTACTTATTTGTATCAATTACTTCAATTGCTCTTCTCATTACTGATATCTATTTTAGTATATTACTTGTATTTCTTCAAGGAGAATGTAGTATTACTCACAAATTAGAGTTTCATTTACTTAAGAAAATGGACATAGAAAGAAAAAAATTAAAAAAAGTGCAAAAAAAAGAATAATTATAGACACAAGAAGAAGGAAAAGAAATAACCTAACTGAAATTTAAATGAACCCAAAAAAGACGTAAATGACACTAGGAAAACTAATGCAAACTATCTTCCAAAAGACTCTTAATTTGTATATAAAATAAATTAGTTTCTTGATGATCTGAAGCCAGAGAATTTGTTGCTTGATGATCAAGGTAAATTAAGGGTTCAATACTCTTTAGTAATTTATTCGCAAATTTCGATCATTTGATTTTGGATCTACCATTGATTTTCTGTTTGTTATGAGTTGCTTGACATATACATATGTACTATAAGACACTTGGTAAAAATTCTCCTTTGTTAGATTCATGGTACCTCACTGTTGAGAAACATACAAAATGAGTATTGCCCTTAACACATTGTTAAATGATTTTGTGATGTATCCATTGCTAATTGATCAATTATTTTGGTTATGAGTTGTGATTGTTGAGAAATAGTTTGTTCCTAATTGTGTAGGAAATTTAAAGATAGCTGACTTTGGTCTTAGTGCATTTGCTGGAGCGGATGATTTGCTCCATACGACATGTGGGACTCCAGTATATGCAGCACCCGAGGTTGCTGAAAGGAAAGGATATGATGGTGAAAAGGGTGATATACGGTACCGTGGAGTCATCTTGTATGTCTTACTAGCTGGTTCTCTTCCATTTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK70438.1	3.7e-18	uncharacterized protein A4U43_C05F33730
Swissprot	Q6Z9F4.1	7.3e-19	OsCIPK06
trEMBL	A0A5P1EWG5	2.7e-18	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G58380.1	68.18	4e-20	92.8	CIPK10;PKS2;SIP1;SNRK3.8	SOS3-interacting protein 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G06020	AT5G58380.1	66	18	1	17	79	147	212	68.18	4e-20	92.8
AfisC2G06020	AT5G01810.3	67	19	1	16	79	146	212	67.16	5e-20	92.4
AfisC2G06020	AT5G01810.2	67	19	1	16	79	146	212	67.16	5e-20	92.4

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	16	79	48.5	6.6e-13

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0050832	P	defense response to fungus
GO:0005739	C	mitochondrion
GO:0004553	F	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005986	P	sucrose biosynthetic process
GO:0006979	P	response to oxidative stress
GO:0007275	P	multicellular organism development
GO:0009414	P	response to water deprivation
GO:0009507	C	chloroplast
GO:0009737	P	response to abscisic acid
GO:0010325	P	raffinose family oligosaccharide biosynthetic process
GO:0010540	P	basipetal auxin transport
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0019593	P	mannitol biosynthetic process
GO:0042538	P	hyperosmotic salinity response
GO:0047274	F	galactinol-sucrose galactosyltransferase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network