result

Gene information

Detail information of AfisC2G06342

Location

Gene	Chr	Start	End	Strand
AfisC2G06342	chr2	1028531845	1028534964	-

Sequences

CDS

Protein

Gene

>AfisC2G06342
ATGACCTTCAAAACTGTTTCCCTTAGCGACATCCAACTGATTCAAAAGCTTGGAAACTGCGACGCGGGAAGTGTGTACCTAGCCACGCTAAAATGCACGGAGGCGAAGAACAGGCGCATGTTAGCAGCGAAGTTCATGGACAAAAAGGAAGCCGAGGGCAGAAACAAAGAAGGAAGGTCGAAGACAGAAAGGGAAATACTGGAAATGCTAGACCATCCATTTTTGCCAAAACTTCAGGGCGTAATGGAGAATGAACGTTGGTTGTGTCTCTTAACTGAGTTCTGTGAAGGTGGAGACATGCATGTTTTGAGGCAAAGACAAGTTGGTAAACGCTTCTCGGAAAATGCCGTCAGGTGAGAAATTTAGGCAGCGTTTGGTTTGAAAACGACCTTTTTGTTTTGCGCTTCTAACCTTTACTTTAACGTGCAAGGAAGAAGAAAAGATGATGTAAAAGTGTCGTTTTGAAAATTGGTTTTACCATGTAAAACTGAAAATAACTCTTATTGGATATAGGTTCAATTCCTCTGTCACCTGTCTCTGTCTGCCACAAAGAATCACACTCACAAAAAGTCCCAATAACGAAATTCTCATTTCAGTTTCTGAGTATGTGTTGTGAGATCACAGATGATGAACCCATAAATTGATATTTGGTTTATCTAACTGTTAAAAGAAAAAAATTGTTATAGTCTATTTTTTGAGAAGTATTGAAAATCGTCTTCTTTTCACCTTCTCTTCTTTGTTGGAATGACTAGGATTACAAAGATCTTCGATTTCAAGCCAAACATTACCTTAACTTTCTAAAACTGCATTGATAAATCTGAAGAAAAAGATTTAACAGAATGATGTTGTTCACTTCTGCATGCAGATTCTATGCCTCAGAGATCATCATAGCAATAGAATATCTCCACATGCTAGGCATTGTGTACAGAGATTTAAAACCTGAAAATGTGCTCGTTCGATCTGATGGCCACATAATGCTCACTGACTTTGATCTCTCTCTAAAATCCGAAGTCCATAGTTCACCAGAGATCCATCTCATTCCTGCCAACAACTTGTTATCAGCTCGAAATTCCCTGCATTATTCACCATTTCTCAAATCATTTTGCATGTCGCCAAAGTACAATGTCGCTGCTATGGTAAATTGTTTTCAACTCAGGAGCAAGAGAAGAAAGAAGCATGGTCACAGTGCTAAAACCCTAGAGTTTGTGGCAGAGCCTTTTGATTTACGGTCAATGTCCTTTGTAGGCACCCATGAGTACTTAGCTCCTGAGATTGTTGCAGGTAATTAACTTGCTCTCCTTTAAGATGAGTACACCAATATTAGAATCAGGAAATTGTTGTTAAGCACAAAAATTTTCAGCATTTTAGCCTCAAGGACAGACCTTCAGTATTTTAGCCTGAATGACAGACCTTTGTGTCCTTGAGGCTAAAAATATATAAATTTTTATCCTTCAAATTAATTCCCCCGAATCAGGATTTCCGAGATCTGTTAAAATAAATTGAAAAGAATCTATACAAATGAGCAAACACACTTCAACCTTGTACTCTTCGGACTCAATATACCTGGAAGTCACAATTAATATATGGGCTACCTTCTCCCTTTTATTAGAGCATCTCCAACCATTTTAAGGTTCAAAAATTACATTTTCATAGATTACAAAATGTAATCGATGTATTTTTCCAACAGAAATAGAAACAAACGCTTGTTCAAACAACATCTACATCTGAATAAGTGATCGACGCTTGTTTAATAGACGTTTAAGTCTCAGGCGCCGGTTGAATAAGCATCCATGTCCAATTATTAGGCAAGTGCCAATCACCTGATGTCAGACGTTTGTTCAGTAGGTGCTTTACCGTTGGACGGTTGCTGAACAAACATCCAAAACAATTACAGATTTGTAATATTTTTCTCCAAATATGTAATCGATTATAAAATGTAACCATTGTTGGAGTGAGTTTTGAGGTTAGATCTCACATTTTGTAATTTTGAACCTTTTGTTGGAGATGCTCTACCAGACCTTTTAGTTGCACCTCTGCTCCTATGGTCCTTCCTCATGGTTTTTCTTGTACCAAGTAAACTGACACTGTTTTCTAAACTTCTTCAAAAGCAGGCATACACCTCAAAAAACATACCCATGCTATGAAAAAAGATGTACACCCACACTAAAATTCAACCTTGCATCTCCTACACACACACATAAACATACATACACACCCTTTAATCAGATGAGTTATCCTTTATTTTGTTAGTTTTATAAATGTATATGTGCTGTATGTGTAGGCAATGGTCATGGAAGCGCAGTAGACTGGTGGACACTTGGAATATTCATGTACGAACTTCTTTACGGGTACACCCCGTTCAGAGGATCGGAGAATGAGCATACGTTGGTGAACATTATGGCATGTGCAGTTGAGTTTCCAAATGACCCTCCAGTTTCAACCTGCACAAAGGAACTTATATCTGGGTTGCTGAACAAAGACCCTGCAAAGAGGATCGGATCTTTAACCGGAGCATCCGCCATCAAAAGACATCCATGTTTCGATGGAGTTAATTGGGCTTTGCTCAGGTCGATTGCTCCTCCATATGTTCCTCCTCCTTTTGATGTATGCAGCAGTGCAGAGGTGTCGGAGGAGGACAGTGATTTGGATAGTCGGGTAGAGTATTTTTAGTTGGAGAAACAGTCGACATAAAGGGAGTTACATGTATGCTTTTATATTCGTCCGAGTGTGCATATTATGCTATGGTAAACAAATATGTAAATGAAATCCTCTGTCCTGTTTTCCCGTTTCATATGTCAACTACATCTTAACCATTGATTTTATAGGCTTAGTTAACAACTGGAGTTCACACTATCATAAACAATGTTGATCATGCAAAATGAATGGGATGGATGAAGTTGGGCACATGGGAATGGGAATAGAGTAAGGAGATATTGGAAGAAGAAAAAACATTTTGTGTTGTGTAAATAGATGTTTTTATTCTTATTCAAACTTAGTGATGTAATTAGGATATGAACTATATTTGATTATTTTTGAGATAAAATTTGTTGAGTATTGTGAATCCAATAATAAGTGGTTGCTTTTGTTGAAATTGTATGACAAATATAAGTTAGATTAATT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010907156.1	4.1e-126	serine/threonine-protein kinase D6PKL2 isoform X2
Swissprot	Q9LTW5.1	5.4e-99	AGC serine/threonine-protein kinase subfamily 1 member 5
trEMBL	A0A6I9QCL7	2.9e-126	serine/threonine-protein kinase D6PKL2 isoform X2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G44610.1	61.71	1e-117	420		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G06342	AT3G44610.1	350	118	6	16	351	74	421	61.71	1e-117	420
AfisC2G06342	AT3G12690.3	364	173	2	6	369	180	535	50.27	3e-105	378
AfisC2G06342	AT3G12690.2	364	173	2	6	369	180	535	50.27	3e-105	378

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	13	194	116.6	1.1e-33
PF00069.22	Pkinase	Domain	240	343	73.1	2.1e-20

Gene Ontology

Accession	Ontology	Name
GO:0004674	F	protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005730	C	nucleolus
GO:0006468	P	protein phosphorylation
GO:0008728	F	GTP diphosphokinase activity
GO:0009507	C	chloroplast
GO:0009734	P	auxin-activated signaling pathway
GO:0009860	P	pollen tube growth
GO:0009882	F	blue light photoreceptor activity
GO:0009908	P	flower development
GO:0009925	C	basal plasma membrane
GO:0009958	P	positive gravitropism
GO:0009986	C	cell surface
GO:0010150	P	leaf senescence
GO:0010540	P	basipetal auxin transport
GO:0015970	P	guanosine tetraphosphate biosynthetic process
GO:0015979	P	photosynthesis
GO:0019901	F	protein kinase binding
GO:0032550	F	purine ribonucleoside binding
GO:0032555	F	purine ribonucleotide binding
GO:0035639	F	purine ribonucleoside triphosphate binding
GO:0048766	P	root hair initiation
GO:0048767	P	root hair elongation
GO:0048825	P	cotyledon development
GO:0080167	P	response to karrikin
GO:1901981	F	phosphatidylinositol phosphate binding
GO:2000114	P	regulation of establishment of cell polarity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network