result

Gene information

Detail information of AfisC2G06367

Location

Gene	Chr	Start	End	Strand
AfisC2G06367	chr2	1031153006	1031156107	+

Sequences

CDS

>AfisC2G06367
ATGGGTGTTAAAATGTTGACCTTTGGGCTCAATTTCTCGATCCAAGTTCTAATCTTGACCACATTTTTCAACTCAACAACACTCAAAGTCTCGTCCCTCGGCTCCATGAACTCAATCGCCGTCTCGTACGGCGAAAACGGGCCCGCTTTCTGCGTTCTTCTCTCAGACGGATCCCACTCAGTCCAGTGTCTAGGATCCGATAACTCAGTGGTATACGGAGCTCCACAAAGAATCCCATTCTCAGGCCTTACAGCCGGGGACAGCTTCGTATGCGGTCTTCTCCTAAACTCGAAGCAGCCTTATTGCTGGGGAAGCAACTTCTACGTCAAAATCGGCGTCCCTCAACCCATTCTCGAGTCCACTGCGTACTCCACAATCAGCGCTGGAGACAATCACTTATGTGCTCTGAGAATCCCAACAAAAGAAAACGCTACCAATTCCATAATCGATTGCTGGGGCTACAACATGACTTCTACACACATTTACAGTTCCAAAGTATCATCAATAACGACAGGTTCATCCTTCACTTGTGGCCTATACGATTCCAATTTATCAGTCTTCTGCTTTGGAGATGAAACTGGAAGCAATGTAGCGAGTTTAATCCCTAGAGCTTTAAACTTTCAATCCATTTCAGCAGGTGGGTTTCATGTATGTGGAGTGTTGCTAAACTTTCAAGTTTATTGCTGGGGTAAGAATGTAGGAGTAAGCAGAGATGATATACAACATGCTCCAATGGATTCTATGGTATCTTTAGTAGGTGGTAAGTTTCATTCATGTGGGATTAAAACAAGTGACAGAGGAGTTGTATGCTGGGGTTTATCTCTTCCAAACAGTGTACCACCTCCTAAAGAGCTTAAAGTGTATGCCATGGCAGCAGGAGACTACTTCACTTGTGGCATTGCTGCAGATATATCATTAACTCCTCATTGCTGGGGAGCAGGTGGCCCTTGGAACTTACCAATAGCCGCCTCTCCTAGTGTTTGCACTGAGCATAAGTGTAGTTCAGGGTTCTTTGAATACAGCCATGTACTTTGCAAGTCTTTGAATTCCAGACTTTGCCTGCCTTGTAGCAATGAATGCCCTGTTGAAATGTATCAAAAGTCTTCGTGCAATGGCACCTCTGATAGCATTTGCCAGTTCAACTGCAGTGCGTGTCACTCTAGTGAATGCTTCTCGTTTTGTTCATCGGACATGGCTAGAAATTGGAGAGTTTTTCTTGGAGAGATAGCATTTGCTGTTGTATTGGTGGTTGTAATAGCATTTGTTGCGTTCACTTACGTGAGGTGCAAGTTGAGGAAATGCAGTTGTTCTAGAAGTGGGGTTAAGGAAGGAGTAATCCAGGGTGGTGCTTTTCACAAAGAGCTTAAAATACAAAGGGCTCGAATGTTCACTTACAAGGAGTTGGAAGAGGCGACCGGTGGGTTTAAAGAAGAGTCCTTGGTAGGAAAAGGAAGCTTCTCATGCGTTTTCAAAGGTGTTTTGAAAGACGGGACTATAGTTGCGGTAAAAAGATCGATCGTGGTGTCATCGGACATAAGGAAGAATTCTAAAGAATTCAAAACCGAACTCGACTTGTTGTCTAGACTTAACCATGCACATCTTTTAAGCCTACTGGGCTACTGTGAAGAAGGAGGGAAAAGGCTTTTGGTGTACGAGTTCATGGCGCATGGTTCATTGTACCAACACTTGCATGGCAAGGACAGTAGCCTTAAAGAAGAGCTGAACTGGGTAAGAAGAGTGACCATAGCAGTGCAAGCGGCTAGAGGCATCGAATACCTGCATGGATATGCATGCCCTCCGGTCATTCATAGGGACATTAAGTCTTCGAACATATTGATAGACGAAGAGCACAATGCACGGGTTTCGGATTTCGGGCTTTCCCTATTAGGCCCGACCGACAGTAACACTCCGTTATCTGAACTGCCAGCTGGCACTCTAGGATATCTCGACCCTGAATATTACAGACTTCACTACTTGACGACGAAATCTGATGTGTACAGTTTCGGGGTGCTGCTTCTGGAAATTTTAAGTGGGAGGAAGGCGATAGACATGCAGTACGAAGAAGGTAATATAGTTGAATGGGCGGTGCCGTTGATCAAAGCGGGCGATGTTTCGTCTATTTTGGACCCGGTTTTGAAACCGCCTTCGGACATTGATGCCCTTAACAAGATAGCGAATGTGGCATGCAAATGTGTTAGGATGAGAGGGAAGGACAGGCCTTCTATGGACAAGGTGACGACTTCATTAGAGAGGGCGGTGGCTATGCTAATGGGAAGTCCATGCAACGAGCAACCGATTTTGCCTAGCGAAGTTGTGTTGGGAAGCAGTAGACTGCATAAGAAGCCCAGTTCGCAGAGGTCGTCGAATCGGTTGGAGAACGAAATGGGCGAGTCGGATGATCAGAGAATCGAGTATAGGGCGCCTTCTTGGATCACTTTTCCGAGTGTTACATCTTCGTCGAGGAGGAGGAAATCGTCTGCTTCGGACATGGATGGTGACGTGAAGTTCATAGAAGGAAGGAATTTGGGGAATAATAGTAATGTTGGAGATAGTTTGAGGTGTTTGGAAGAGGAAATTGGACCTGCCTCGCCTAGGGAGCATTTGTTCTTGCAGAATAACTTTTGA

Protein

Gene

>AfisC2G06367
CTCGAATTTAATGCATTAATTTCTTCCACCTCTCTCATTTGCTTTCTCTGTCTCCTTTGCTGTTCCTTTCTCATCTAATCAATCAAGTTTTTCCTCTTCGTATTGTAACGTAAAGCTCTTTCTTGTAGACAAAAGAAGAAGACGGTACCCATGCCGAGTGCTTACCGCTCTTCGACTTTCCTCACAAAACGTCCATCAATGTAAGTGCCAAGTATCTTAGTCACTAATTTGAATTCTGATTACTCGTTCTTAATTCTTTTCCGTTGACAATCAATTCCTTTACCAGCTCGACGATATACGCTGCGTGCTCTGTTTCTTAGCTAAAAAAACCAATTTTGAGCACATGGGTGTTAAAATGTTGACCTTTGGGCTCAATTTCTCGATCCAAGTTCTAATCTTGACCACATTTTTCAACTCAACAACACTCAAAGTCTCGTCCCTCGGCTCCATGAACTCAATCGCCGTCTCGTACGGCGAAAACGGGCCCGCTTTCTGCGTTCTTCTCTCAGACGGATCCCACTCAGTCCAGTGTCTAGGATCCGATAACTCAGTGGTATACGGAGCTCCACAAAGAATCCCATTCTCAGGCCTTACAGCCGGGGACAGCTTCGTATGCGGTCTTCTCCTAAACTCGAAGCAGCCTTATTGCTGGGGAAGCAACTTCTACGTCAAAATCGGCGTCCCTCAACCCATTCTCGAGTCCACTGCGTACTCCACAATCAGCGCTGGAGACAATCACTTATGTGCTCTGAGAATCCCAACAAAAGAAAACGCTACCAATTCCATAATCGATTGCTGGGGCTACAACATGACTTCTACACACATTTACAGTTCCAAAGTATCATCAATAACGACAGGTTCATCCTTCACTTGTGGCCTATACGATTCCAATTTATCAGTCTTCTGCTTTGGAGATGAAACTGGAAGCAATGTAGCGAGTTTAATCCCTAGAGCTTTAAACTTTCAATCCATTTCAGCAGGTGGGTTTCATGTATGTGGAGTGTTGCTAAACTTTCAAGTTTATTGCTGGGGTAAGAATGTAGGAGTAAGCAGAGATGATATACAACATGCTCCAATGGATTCTATGGTATCTTTAGTAGGTGGTAAGTTTCATTCATGTGGGATTAAAACAAGTGACAGAGGAGTTGTATGCTGGGGTTTATCTCTTCCAAACAGTGTACCACCTCCTAAAGAGCTTAAAGTGTATGCCATGGCAGCAGGAGACTACTTCACTTGTGGCATTGCTGCAGATATATCATTAACTCCTCATTGCTGGGGAGCAGGTGGCCCTTGGAACTTACCAATAGCCGCCTCTCCTAGTGTTTGCACTGAGCATAAGTGTAGTTCAGGGTTCTTTGAATACAGCCATGTACTTTGCAAGTCTTTGAATTCCAGACTTTGCCTGCCTTGTAGCAATGAATGCCCTGTTGAAATGTATCAAAAGTCTTCGTGCAATGGCACCTCTGATAGCATTTGCCAGTTCAACTGCAGTGCGTGTCACTCTAGTGAATGCTTCTCGTTTTGTTCATCGGACATGGCTAGAAATTGGAGAGTTTTTCTTGGAGAGATAGCATTTGCTGTTGTATTGGTGGTTGTAATAGCATTTGTTGCGTTCACTTACGTGAGGTGCAAGTTGAGGAAATGCAGTTGTTCTAGAAGTGGGGTTAAGGAAGGAGTAATCCAGGGTGGTGCTTTTCACAAAGAGCTTAAAATACAAAGGGCTCGAATGTTCACTTACAAGGAGTTGGAAGAGGCGACCGGTGGGTTTAAAGAAGAGTCCTTGGTAGGAAAAGGAAGCTTCTCATGCGTTTTCAAAGGTGTTTTGAAAGACGGGACTATAGTTGCGGTAAAAAGATCGATCGTGGTGTCATCGGACATAAGGAAGAATTCTAAAGAATTCAAAACCGAACTCGACTTGTTGTCTAGACTTAACCATGCACATCTTTTAAGCCTACTGGGCTACTGTGAAGAAGGAGGGAAAAGGCTTTTGGTGTACGAGTTCATGGCGCATGGTTCATTGTACCAACACTTGCATGGCAAGGACAGTAGCCTTAAAGAAGAGCTGAACTGGGTAAGAAGAGTGACCATAGCAGTGCAAGCGGCTAGAGGCATCGAATACCTGCATGGATATGCATGCCCTCCGGTCATTCATAGGGACATTAAGTCTTCGAACATATTGATAGACGAAGAGCACAATGCACGGGTTTCGGATTTCGGGCTTTCCCTATTAGGCCCGACCGACAGTAACACTCCGTTATCTGAACTGCCAGCTGGCACTCTAGGATATCTCGACCCTGAATATTACAGACTTCACTACTTGACGACGAAATCTGATGTGTACAGTTTCGGGGTGCTGCTTCTGGAAATTTTAAGTGGGAGGAAGGCGATAGACATGCAGTACGAAGAAGGTAATATAGTTGAATGGGCGGTGCCGTTGATCAAAGCGGGCGATGTTTCGTCTATTTTGGACCCGGTTTTGAAACCGCCTTCGGACATTGATGCCCTTAACAAGATAGCGAATGTGGCATGCAAATGTGTTAGGATGAGAGGGAAGGACAGGCCTTCTATGGACAAGGTGACGACTTCATTAGAGAGGGCGGTGGCTATGCTAATGGGAAGTCCATGCAACGAGCAACCGATTTTGCCTAGCGAAGTTGTGTTGGGAAGCAGTAGACTGCATAAGAAGCCCAGTTCGCAGAGGTCGTCGAATCGGTTGGAGAACGAAATGGGCGAGTCGGATGATCAGAGAATCGAGTATAGGGCGCCTTCTTGGATCACTTTTCCGAGTGTTACATCTTCGTCGAGGAGGAGGAAATCGTCTGCTTCGGACATGGATGGTGACGTGAAGTTCATAGAAGGAAGGAATTTGGGGAATAATAGTAATGTTGGAGATAGTTTGAGGTGTTTGGAAGAGGAAATTGGACCTGCCTCGCCTAGGGAGCATTTGTTCTTGCAGAATAACTTTTGAACTGTAAGAATTGGAATTCTATTAACCATTTTTACCTTTTTTTTTCTTCTGTGGTTTTATGTATGTAATTTAAGTTTGTTGAAGGTTCAGTCAATTTGTATTCTCAGCAAGTGTTGAAAGTGTGGGAATAATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020263634.1	0.0e+00	serine/threonine-protein kinase-like protein CR4 isoform X1
Swissprot	Q75J39.1	0.0e+00	Protein CRINKLY 4
trEMBL	A0A5P1F5P2	0.0e+00	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G59420.1	57.82	0.0	1001	ACR4;CR4	crinkly4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G06367	AT3G59420.1	901	320	15	16	874	13	895	57.82	0.0	1001
AfisC2G06367	AT3G09780.1	796	411	29	31	751	22	767	32.66	2e-95	347
AfisC2G06367	AT2G39180.1	790	439	25	30	753	20	770	31.14	1e-93	341

Ortholog group

Species	Genes
Allium cepa	g415204.t1
Allium fistulosum	AfisC2G06367
Allium sativum	Asa6G03793.1
Arabidopsis thaliana	AT3G59420.1
Oryza sativa	LOC_Os03g43670.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	478	748	148.7	1.7e-43

Gene Ontology

Accession	Ontology	Name
GO:0000166	F	nucleotide binding
GO:0003676	F	nucleic acid binding
GO:0006952	P	defense response
GO:0005576	C	extracellular region
GO:0004674	F	protein serine/threonine kinase activity
GO:0005768	C	endosome
GO:0030139	C	endocytic vesicle
GO:0006725	P	cellular aromatic compound metabolic process
GO:0009506	C	plasmodesma
GO:0009628	P	response to abiotic stimulus
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009786	P	regulation of asymmetric cell division
GO:0009793	P	embryo development ending in seed dormancy
GO:0009860	P	pollen tube growth
GO:0009908	P	flower development
GO:0009941	C	chloroplast envelope
GO:0009986	C	cell surface
GO:0010035	P	response to inorganic substance
GO:0010311	P	lateral root formation
GO:0010467	P	gene expression
GO:0016324	C	apical plasma membrane
GO:0019199	F	transmembrane receptor protein kinase activity
GO:0019901	F	protein kinase binding
GO:0031090	C	organelle membrane
GO:0042803	F	protein homodimerization activity
GO:0044249	P	cellular biosynthetic process
GO:0044711	P	single-organism biosynthetic process
GO:0046777	P	protein autophosphorylation
GO:0048829	P	root cap development
GO:0051510	P	regulation of unidimensional cell growth
GO:0090404	C	pollen tube tip
GO:1901360	P	organic cyclic compound metabolic process
GO:1901576	P	organic substance biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network