Detail information of AfisC2G06648


Location
GeneChrStartEndStrand
AfisC2G06648chr210715166631071539407-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010920864.13.3e-301NF-X1-type zinc finger protein NFXL2
SwissprotQ9FFK8.28.6e-238Protein EARLY BIRD
trEMBLA0A6I9R5L72.4e-301NF-X1-type zinc finger protein NFXL2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G05660.154.880.0 915ATNFXL2;EBI;NFXL2sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors

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Ortholog group
SpeciesGenes
Allium cepag500514.t1
Allium fistulosumAfisC2G06648
Allium sativumAsa3G01729.1
Arabidopsis thalianaAT5G05660.1
Oryza sativaLOC_Os01g06550.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01422.14zf-NF-X1Family17218919.70.00057
PF01422.14zf-NF-X1Family22424225.49.7e-06
PF01422.14zf-NF-X1Family27729420.00.00047
PF01422.14zf-NF-X1Family33135018.70.0012
PF01422.14zf-NF-X1Family38440218.10.0019
PF01422.14zf-NF-X1Family40542916.00.0083
PF01422.14zf-NF-X1Family4784889.11.3
PF01422.14zf-NF-X1Family4975065.714
PF01422.14zf-NF-X1Family5795899.70.8
PF01422.14zf-NF-X1Family6306477.05.6
PF01422.14zf-NF-X1Family6957073.284

Gene Ontology
AccessionOntologyName
GO:0003676Fnucleic acid binding
GO:0016020Cmembrane
GO:0006351Ptranscription, DNA-templated
GO:0044464Ccell part

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15683NFXL1, OZFP; NF-X1-type zinc finger protein NFXL1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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