result

Gene information

Detail information of AfisC2G07318

Location

Gene	Chr	Start	End	Strand
AfisC2G07318	chr2	1176306225	1176307343	-

Sequences

CDS

Protein

Gene

>AfisC2G07318
ATGTATGGAAATGGAACTACTTCTACCCCGAATCATCAGGAGTATATGAAAAATGAAGAAGATGTTACTAGTTACAAGGAGTCGATAGTCATGGAACCGGAAAATAGCAATAACAGCAATGAGAAGGATGAAAACAAGAAGGTTAAAGGAGATAAGAAAGTGAGAAGGCAAAGATTTGCATTTCAGACAAGGAGTCAAGTTGATATTCTTGATGATGGTTATAGATGGAGGAAGTATGGCCAAAAAGCTGTCAAGAACAACAATTTTCCCAGGTTTCTTTTCTCTCTCTTCAGATCATTCAATAATTCTTAATTTTTTATTTATAATTGCTTACCTTTAAATATGTTGTTGCTTAGATAGATAACTAAAGGATTAGATGTCCATCTACTGATATATATAACACTGAAGCATGATATTTATCAGTTCTTGTGAACACAGATAAGAGTTTCAATCGTTTTGATATTCACAAGTTTTCAGGTTTTTTTGGACAGTACAGAAAAAAAGCCCATTCCATGAACTACTTATTCCACTAGATCAATATGGATTGACTAATATAATATTAATCTTGACTATATATACATACATACATATATGTATGTATGTATTGTTGAAGAAAGTGAAGAAAATAATGATAGTAGAATATGTAGCATATTGTCCATAATTAACATGCCAATGTTGGAACCAATTACTTCTTCATTTTGAAGGGGACCAAGGAAAGTAAGTTTACATGCTTTGTAGTCGTCACATGAACAGTATCACTGTGATGTAATAACTAATAAGACCGTGCTCTAAAACTGACTTTGAAAAGTCTTCTTTAGCAAGAAAATCATATAATGAAGTAACCTTTTTTTTTCACTTCTAGAAGTTGGCATTACACACAGACACAAACACAAAAGCTATATTAATTGGTTTATCTAAAATAAAGCTACAATTAATATTAGGAGCTACTACAGATGCACGCATCAAGGCTGCAATGTGAAGAAGCAAGTTCAAAGACTATCAAAGGATGAAGGAGTTGTAGTAACTACTTATGAAGGAGTGCACACTCATCCTATTCAGAAGTCCAATGACAATTTTGAGCATATTTTGAACCAAATGCAGATTTATTCAGCATTTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010913024.1	2.9e-48	probable WRKY transcription factor 75
Swissprot	Q9FYA2.1	5.2e-42	WRKY DNA-binding protein 75
trEMBL	A0A6I9QPM3	2.1e-48	probable WRKY transcription factor 75

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G13080.1	84.95	6e-45	176	ATWRKY75;WRKY75	WRKY DNA-binding protein 75

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G07318	AT5G13080.1	93	14	57	149	53	145	84.95	6e-45	176
AfisC2G07318	AT3G01970.1	92	21	58	149	52	143	77.17	2e-39	157
AfisC2G07318	AT1G64000.1	101	36	47	147	90	190	64.36	1e-34	142

Ortholog group

Species	Genes
Allium cepa	g166733.t1
Allium fistulosum	AfisC2G07318
Allium sativum	Asa0G03874.1
Arabidopsis thaliana	AT3G01970.1; AT5G13080.1
Oryza sativa	LOC_Os11g29870.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	71	128	94.4	3.4e-27

Gene Ontology

Accession	Ontology	Name
GO:0000122	P	negative regulation of transcription from RNA polymerase II promoter
GO:0001046	F	core promoter sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0006817	P	phosphate ion transport
GO:0008134	F	transcription factor binding
GO:0009409	P	response to cold
GO:0009414	P	response to water deprivation
GO:0009611	P	response to wounding
GO:0009624	P	response to nematode
GO:0009733	P	response to auxin
GO:0009737	P	response to abscisic acid
GO:0009867	P	jasmonic acid mediated signaling pathway
GO:0009961	P	response to 1-aminocyclopropane-1-carboxylic acid
GO:0010055	P	atrichoblast differentiation
GO:0010200	P	response to chitin
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0032107	P	regulation of response to nutrient levels
GO:0043620	P	regulation of DNA-templated transcription in response to stress
GO:0048527	P	lateral root development
GO:0051607	P	defense response to virus
GO:0070301	P	cellular response to hydrogen peroxide
GO:0070370	P	cellular heat acclimation
GO:1901002	P	positive regulation of response to salt stress
GO:1901141	P	regulation of lignin biosynthetic process
GO:1904369	P	positive regulation of sclerenchyma cell differentiation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network