Detail information of AfisC2G07560
| Gene | Chr | Start | End | Strand |
|---|
| AfisC2G07560 | chr2 | 1223977612 | 1223979201 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | ONK59928.1 | 2.3e-36 | uncharacterized protein A4U43_C08F12390 |
| Swissprot | Q05024.1 | 3.7e-10 | Protein TRI1 |
| trEMBL | A0A8J5H2G0 | 6.6e-33 | SWIB/MDM2 domain-containing protein |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT4G34290.1 | 71.43 | 3e-31 | 130 | | SWIB/MDM2 domain superfamily protein |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC2G07560 | AT4G34290.1 | 84 | 23 | 1 | 51 | 134 | 61 | 143 | 71.43 | 3e-31 | 130 |
| AfisC2G07560 | AT2G14880.1 | 114 | 53 | 1 | 22 | 134 | 27 | 140 | 52.63 | 1e-29 | 125 |
| AfisC2G07560 | AT3G03590.1 | 91 | 38 | 1 | 48 | 136 | 51 | 141 | 56.04 | 3e-23 | 103 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF02201.15 | SWIB | Domain | 63 | 134 | 96.9 | 4.1e-28 |
| Accession | Ontology | Name |
|---|
| GO:0000500 | C | RNA polymerase I upstream activating factor complex
|
| GO:0001165 | F | RNA polymerase I upstream control element sequence-specific DNA binding
|
| GO:0001168 | F | transcription factor activity, RNA polymerase I upstream control element sequence-specific binding
|
| GO:0005737 | C | cytoplasm
|
| GO:0006325 | P | chromatin organization
|
| GO:0006355 | P | regulation of transcription, DNA-templated
|
| GO:0042790 | P | transcription of nuclear large rRNA transcript from RNA polymerase I promoter
|
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| - | - | - | - | - |