Detail information of AfisC2G07734


Location
GeneChrStartEndStrand
AfisC2G07734chr212595844881259605267-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK79983.12.4e-59uncharacterized protein A4U43_C01F12510
SwissprotQ5VSA8.11.1e-48GAGA-binding transcriptional activator BBR-D
trEMBLA0A5P1FQI41.7e-59GAGA-binding transcriptional activator

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G21240.146.902e-70 262ATBPC4;BBR;BPC4basic pentacysteine 4

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag9755.t1
Allium fistulosumAfisC2G07734
Allium sativumAsa5G03261.1
Arabidopsis thalianaAT2G21240.1; AT2G21240.2; AT4G38910.1; AT4G38910.2; AT5G42520.1; AT5G42520.2; AT5G42520.3
Oryza sativaLOC_Os06g04010.1; LOC_Os06g04010.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF06217.9GAGA_bindDomain26285290.62.2e-86

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005730Cnucleolus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009723Presponse to ethylene
GO:0042803Fprotein homodimerization activity
GO:0043565Fsequence-specific DNA binding
GO:0050793Pregulation of developmental process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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