Detail information of AfisC2G07872


Location
GeneChrStartEndStrand
AfisC2G07872chr212832471401283263092-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK58992.18.9e-127uncharacterized protein A4U43_C08F1850
SwissprotF4JN35.14.6e-64Calmodulin-binding NAC protein
trEMBLA0A199V7U41.3e-100NAC domain-containing protein 14

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G35580.138.213e-70 263CBNAC;NTL9NAC transcription factor-like 9

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag435645.t1
Allium fistulosumAfisC2G07872
Allium sativumAsa5G03136.1
Arabidopsis thaliana
Oryza sativaLOC_Os06g01230.1; LOC_Os06g01230.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily1013898.23.4e-28

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0000976Ftranscription regulatory region sequence-specific DNA binding
GO:0002230Ppositive regulation of defense response to virus by host
GO:0002237Presponse to molecule of bacterial origin
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0003713Ftranscription coactivator activity
GO:0050832Pdefense response to fungus
GO:0005737Ccytoplasm
GO:0005730Cnucleolus
GO:0008283Pcell proliferation
GO:0016032Pviral process
GO:0009555Ppollen development
GO:0009819Pdrought recovery
GO:0009735Presponse to cytokinin
GO:0009737Presponse to abscisic acid
GO:0009741Presponse to brassinosteroid
GO:0009814Pdefense response, incompatible interaction
GO:0009834Pplant-type secondary cell wall biogenesis
GO:0010016Pshoot system morphogenesis
GO:0010150Pleaf senescence
GO:0010200Presponse to chitin
GO:0010228Pvegetative to reproductive phase transition of meristem
GO:0012505Cendomembrane system
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0042803Fprotein homodimerization activity
GO:0043621Fprotein self-association
GO:0044425Cmembrane part
GO:0045491Pxylan metabolic process
GO:0046982Fprotein heterodimerization activity
GO:0048759Pxylem vessel member cell differentiation
GO:0048829Proot cap development
GO:0070417Pcellular response to cold
GO:0071365Pcellular response to auxin stimulus
GO:2000377Pregulation of reactive oxygen species metabolic process
GO:0090059Pprotoxylem development
GO:0090602Psieve element enucleation
GO:1900103Ppositive regulation of endoplasmic reticulum unfolded protein response
GO:1905393

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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