result

Gene information

Detail information of AfisC2G07909


Location
GeneChrStartEndStrand
AfisC2G07909chr212899197631289948187-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrRDX85409.11.5e-65Serine/threonine-protein kinase/endoribonuclease IRE1a, partial
SwissprotQ7XIT1.14.9e-58Endoribonuclease
trEMBLA0A371G4A41.1e-65non-specific serine/threonine protein kinase (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT2G17520.132.788e-54 209ATIRE1-2;AtIRE1A;IRE1-2;IRE1AEndoribonuclease/protein kinase IRE1-like

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain149413100.21.1e-28
PF06479.9Ribonuc_2-5AFamily41954660.02.2e-16
PF00646.30F-boxDomain57660836.72.3e-09

Gene Ontology
AccessionOntologyName
GO:0051276Pchromosome organization
GO:0000166Fnucleotide binding
GO:0005515Fprotein binding
GO:0000394PRNA splicing, via endonucleolytic cleavage and ligation
GO:0000776Ckinetochore
GO:0006915Papoptotic process
GO:0004519Fendonuclease activity
GO:0004540Fribonuclease activity
GO:0004674Fprotein serine/threonine kinase activity
GO:0035556Pintracellular signal transduction
GO:0005634Cnucleus
GO:0005789Cendoplasmic reticulum membrane
GO:0005819Cspindle
GO:0005874Cmicrotubule
GO:0006351Ptranscription, DNA-templated
GO:0006397PmRNA processing
GO:0006914Pautophagy
GO:0007067Pmitotic nuclear division
GO:0007346Pregulation of mitotic cell cycle
GO:0051707Presponse to other organism
GO:0010468Pregulation of gene expression
GO:0010564Pregulation of cell cycle process
GO:0045935Ppositive regulation of nucleobase-containing compound metabolic process
GO:0018105Ppeptidyl-serine phosphorylation
GO:0030968Pendoplasmic reticulum unfolded protein response
GO:0031090Corganelle membrane
GO:0043167Fion binding
GO:0044710Psingle-organism metabolic process
GO:0045786Pnegative regulation of cell cycle
GO:0045860Ppositive regulation of protein kinase activity
GO:0046777Pprotein autophosphorylation
GO:0051252Pregulation of RNA metabolic process
GO:0071216Pcellular response to biotic stimulus
GO:0090501PRNA phosphodiester bond hydrolysis
GO:0098813Pnuclear chromosome segregation
GO:1901700Presponse to oxygen-containing compound
GO:1902589Psingle-organism organelle organization

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08852ERN1; serine/threonine-protein kinase/endoribonuclease IRE1EC:2.7.11.1 3.1.26.- Protein processing in endoplasmic reticulumko04141
Autophagy - animalko04140
Apoptosisko04210

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.