Detail information of AfisC2G07961


Location
GeneChrStartEndStrand
AfisC2G07961chr213001450041300162624+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020276823.13.8e-78growth-regulating factor 4-like
SwissprotQ6ZIK5.14.4e-55Transcription activator GRF4
trEMBLA0A8J5YVF86.1e-62Growth-regulating factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G13960.158.563e-36 148AtGRF5;GRF5growth-regulating factor 5

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Ortholog group
SpeciesGenes
Allium cepag225245.t1; g58029.t1
Allium fistulosumAfisC2G07961
Allium sativumAsa6G01296.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08880.8QLQDomain53642.24.6e-11
PF08879.7WRCDomain6710970.47.1e-20

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005739Cmitochondrion
GO:0005829Ccytosol
GO:0005524FATP binding
GO:0005618Ccell wall
GO:0005635Cnuclear envelope
GO:0005774Cvacuolar membrane
GO:0005794CGolgi apparatus
GO:0006351Ptranscription, DNA-templated
GO:0006995Pcellular response to nitrogen starvation
GO:0008285Pnegative regulation of cell proliferation
GO:0009506Cplasmodesma
GO:0009570Cchloroplast stroma
GO:0009624Presponse to nematode
GO:0009631Pcold acclimation
GO:0009739Presponse to gibberellin
GO:0009742Pbrassinosteroid mediated signaling pathway
GO:0010114Presponse to red light
GO:0010218Presponse to far red light
GO:0044212Ftranscription regulatory region DNA binding
GO:0016036Pcellular response to phosphate starvation
GO:0050826Presponse to freezing
GO:0019222Pregulation of metabolic process
GO:0019760Pglucosinolate metabolic process
GO:0046686Presponse to cadmium ion
GO:0030912Presponse to deep water
GO:0043565Fsequence-specific DNA binding
GO:0045309Fprotein phosphorylated amino acid binding
GO:0048046Capoplast
GO:0048364Proot development
GO:0048366Pleaf development
GO:0051365Pcellular response to potassium ion starvation
GO:0061062Pregulation of nematode larval development
GO:0080167Presponse to karrikin

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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