result

Gene information

Detail information of AfisC2G07977


Location
GeneChrStartEndStrand
AfisC2G07977chr213027934661302825246+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrQEU57405.11.4e-256beta-amylase
SwissprotQ9FH80.12.6e-196Beta-amylase 2
trEMBLA0A5J6EFV09.9e-257Beta-amylase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT5G45300.158.350.0 703BAM8;BMY2beta-amylase 2

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Ortholog group
SpeciesGenes
Allium cepag239563.t1
Allium fistulosumAfisC2G07977
Allium sativumAsa6G01291.1; Asa6G01292.1
Arabidopsis thalianaAT5G45300.1; AT5G45300.2
Oryza sativaLOC_Os02g03690.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF05687.10BES1_NFamily37126134.53.5e-39
PF01373.14Glyco_hydro_14Domain209581266.43.6e-79

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005829Ccytosol
GO:0005634Cnucleus
GO:0005983Pstarch catabolic process
GO:0042802Fidentical protein binding
GO:0009414Presponse to water deprivation
GO:0009507Cchloroplast
GO:0009934Pregulation of meristem structural organization
GO:0010075Pregulation of meristem growth
GO:0010480Pmicrosporocyte differentiation
GO:0016161Fbeta-amylase activity
GO:0033612Freceptor serine/threonine kinase binding
GO:0043167Fion binding
GO:0043621Fprotein self-association
GO:0048229Pgametophyte development
GO:0048831Pregulation of shoot system development
GO:0080027Presponse to herbivore

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K01177E3.2.1.2; beta-amylaseEC:3.2.1.2 Starch and sucrose metabolismko00500

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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