result

Gene information

Detail information of AfisC2G07982

Location

Gene	Chr	Start	End	Strand
AfisC2G07982	chr2	1303553397	1303555362	+

Sequences

CDS

Protein

Gene

>AfisC2G07982
ATGAACTTAAGACGAGGTCATGGTCAGCCCATTTATGAATCACAACTAAAGAATATGGACACCTAACCTAAATTTACAGCCTCAAGTTGTATTCATGCTTTCAAGAATTCACCTAATGGCTGATGTAATATTGATTTTTGTTTTTCTTTCTCTTATTATAGGTTCAGTGAATGGTGGTAACTGTGGTGAGCTTACCAAGCAAGAAGACATTGATGGATTTTTGTTCGGAGGTGCTTCTTTGAAGGTATACACATATATACACCCTTTAAATTCCCTAATAAAAGGCGGGGGTCGTGAAAAAACCTCCATGGAGATTAGTTGAACATGCTTCTAATGAATATCCCTTGAAAATGCTGGCTGATGCAAGTAACTCCCTCTCTTCTTTTCCTTTTTAGGCAGCATTTACCAAATAATCTGGCGAATGTTTTCTCCTTAGTTAGCAAACCATAATACAAATGTTAAATGACATGAGAAGATATCTATAAACATGATTATTAATTGTCATCACCATATAAATGGAATAATTAGATATTGAATGACAGGAACAGATATTTACAAGGGTCATTGTTAACATGTGAGCACATGTTAAAATATTTGGATATCATTTTCCATTAAAAAAGTTGAGTATGGGTTCACCAAATACGTCAACATCATTGGATTTTGAATTTAATGGTTAAAATCACATGAACTCATAAATGATAATAAATAATCATTATTGAAATAATAATTGAATGAAAATAGTTGGATTTAAATTTTTATGGCTAAATATAATTGGTGAACTTCTTTACTTTTATAGTAGAGGAGGCGGTCCAGTTCCCACATTAACAGCCACTAAGAAACTGAAGACAGTAAATAAAAACACATATATGCTGGAAACTTAAAATTATCCTTTTCAAATAGAGGATGGACTATCTTAAGGGCTATTTAAGTAATTGTACAATGTTGGCTCAGGTGGCAACTAATAATATTTTCCTATTGGTAATCATGATTGCAATGTCTCACCGCATTTACTCGAGCATTTTCTTTTCTGGTATCATCTAATGCATCTAGCATACCATATTGTTACATTGATTTTTCTTTCAAAAATTTTTATGTGCGTCATATTATAAAAGGATATATATCGCAAACGATGAAGCTTGGAGCACTTGGTGTTGCACCTTACAAATTATTTTCATTGGAAGAGCTTGAAGCAACAACCAACAATTTTGATCCATCAAATTTTATGGGTGAAGGATCACATGGTCAGGCATATCCTCATTAATTTAATAATATTATATTAGTTTTTTGAATGACTTCATCTGTCTATGTGTATATAATCCATACTTGTTACTTTGCCAACTAGAAAAAATTACCCCTGCCATTTTATCCAAATTCCTTTCAATATCAGATGTATAGAGGAAAGTTAAAAGATGGTTCCCTGGAAGCAATAAGATGCTTAAAACTAAAAAGAAGCCACAGTTCACAGAACTTCAATCGACATATTGAACTTATCTCAAAGCTTAAACATCGCCATTTAGTTAGCGCTCTTGGTCACTACTTCGAATACCATCTTCATGATTCAACTGTCAGTAGATTATTTCTTGTTTTTGAATTCGTGTCGAATGGATCACTTAGAGACAATATTTCATGTAAGTTATTATTCATTGTCTTTCTCCTTTTATAATTTATATCATAAAAGGAAATGCATTTATTCTATGAAACTCTACTACAGATTCAAATTATTTTGCGATATTATTTGTATGATTATTATTTTATTTTAAAAAATATTAATTATTTAGGTAGAAATGGAGGGCAAAAGCTTACGTGGTCACAGCGAATAACTGCTGCCATAGGAGTGGCTAGAGCAATAAAATTCTTGCATGCTAGTATAATACCCGGATTATTTGCAAATAATTTAAAGATAACAAATGTTTTACTTTATCAAAATCTTATTGCGAAATTAGCAGCTATAATCTACCAGTGCTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256025.1	2.7e-53	probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 isoform X2
Swissprot	Q8LFN2.1	1.2e-42	Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770
trEMBL	A0A5P1FCK6	2.0e-53	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G03770.1	57.79	1e-47	185		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G07982	AT3G03770.2	154	65	0	17	170	474	627	57.79	1e-47	185
AfisC2G07982	AT3G03770.1	154	65	0	17	170	474	627	57.79	1e-47	185
AfisC2G07982	AT1G14390.1	142	71	2	33	170	456	595	45.77	1e-31	132

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00121.15	TIM	Domain	6	34	26.6	3.1e-06
PF07714.14	Pkinase_Tyr	Domain	45	169	45.9	3.8e-12

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0005768	C	endosome
GO:0043231	C	intracellular membrane-bounded organelle
GO:0008289	F	lipid binding
GO:0046983	F	protein dimerization activity
GO:0042802	F	identical protein binding
GO:0009416	P	response to light stimulus
GO:0009506	C	plasmodesma
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009908	P	flower development
GO:0048646	P	anatomical structure formation involved in morphogenesis
GO:0019901	F	protein kinase binding
GO:0030154	P	cell differentiation
GO:0044446	C	intracellular organelle part
GO:0046777	P	protein autophosphorylation
GO:0048580	P	regulation of post-embryonic development
GO:0048827	P	phyllome development
GO:0048878	P	chemical homeostasis
GO:0051510	P	regulation of unidimensional cell growth
GO:0098588	C	bounding membrane of organelle
GO:0098805	C	whole membrane
GO:1905392

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network