result

Gene information

Detail information of AfisC2G08742

Location

Gene	Chr	Start	End	Strand
AfisC2G08742	chr2	1440543797	1440546455	+

Sequences

CDS

Protein

Gene

>AfisC2G08742
ATGCTTCCAACACATAGTGCAGGGAAAGAGAGTGGATCAATTATGAAGAAGCTGGGAATTGTGAAGGCGGAGTATGGCACTTTGACGTTGCTTGCTGCCTTGGAAAAGGTTAGTCGCTTTCTTTTCTTATTTACAATGGCTTCCCCCTACAAGCTATGTTTATTCACCATATAACAGTTTCAGTGCTGCTTCACCATCTATTTTCAACTTTGCACAAAGCAATGGAAATAAAAAGTTTTTCTTAAGTATATCTTTGCATTTTATTTTAAATCTATTGTCATCCTATGTTTTAAATCTATTGTCATCCTATATTTTAAACCGTTTCAAGATAAATCATAAGAATCAACTAGTTTTGATTACGTTAAGGTTCCTTTGGGACAAAGTGTGCGATGTAAAATGAAAATAAAATGCTCCAATGAAGTATAGCTGTAAAAAAAGAACCAATGGATTCAACAATTCCTCCCAACCTTTTTTACTTAACTAATATAATTAAATTCAAGTAGTATTACTATTTCCCACTTATAGTACTAACTAATTATTATTTATGGTTTGTCATCTTTTGAATGTTATTAGTTACTGTCAGGTGCTTGCTAAGGTAGTGAAATCCATTCAAAATCTAGATTGAAAGACAACAAAGGAGAATGGAAAGAATTCTTGGATCATTATGAAAAAGGTTTTGGTTCTTCCTGGAGTGAGCCTTCAAGAAGGACTATTGATGTATTGGTTGCTTTTATTCAAACATTCACCAAGAAAAAAGACTGTAAGGTGCTTATTTAACCTTTATTTTCATTGCTATTTGATGAATTAATAGTCACTGTAAACCTTACAGTTATACTTGTAACAATATACATTAGCATTCATCACATACACCCTTTTGTTAGGTGTATAGTTTGTGTGCTTACAGCATGGAATAAAGGACAATTCAAAGTAATTTTAGGACGGAGATTGTGTTCTATCAACATATTAATGTTCTTCATGGCTTTTTTTCTAAAAGTCTATTGATTGTTTCAGCTTATTACGAATACGATACTAAGGCGCACTAATCAAGCATCAATTGAACAATGTATCAAGGAATTTCCAAAAATAGGAGACTCCTCAATAGGTATATATTTTCTTGGTCAAACTAATCTTTATATTGTGTTTTATGGTCTATAAAACAAAGTCCATCAACAATTTTGCAAAACGAGATATAAATTAATATGTTTTTTGGTTTCAAGTGTTTTCCAACTGTCTCGGAACCTGTGATTATACGGAGAGATGTACCAAATACGATATTCATTATATTTTAGATTGAAAAACTGAGAATATTATTTTTTTCTCACTATATTATTGTTTAAGTATACTGTACATTGTTTCAGTATAGTGCAAATGCTAGGTGAACTTGAAAAAAGTGAGGATTTCCAAAATTTCATGTTCTAGATAAAATGATGTTCAAATTTTATTTGAAAATGCAATTACAACAAACATATGACAAGTTGGTTTAGACATATGAACAATTAAAACCTTTTCCTTTATTTCATGTAATCATATTCCGTTTGTTCTAATAGATTTTTATTTTGAGTCATTATGGTTAAATATCTTGTCTGGTAAACCTTGCCAATTACTCAAATGACATGTCCTTAAGTAGGCTATTGATTTCTTAGAGAACTAATTATATTGGATGACCTGTAAAATTTGAGACATAGCTATTATGCCTTTTGCTCTGCTTATAATATTTATATAAAATATAGTAAATTGATAAACTAGTTGTCTCTGGTATGACACGTTATATACATTTAACCAAACAAGTTTTAATCTCTTACCGCTACTTTTGATTTTGTGCTTCTAAAATGTTGACCTATTGAGCTATTAATCAAATGGTCTGGGTTCAAATCTTTCAGTTGTTTATTAAATGTTATATTTATCTATGGATAAATATTAACTCAAACATCATAATAATCAAGCTTACTCTACCCCTTTAAAGCACATTCATATCATAGATGGCGATCTTCTTGCTTTTCCCTGCAAATTGCCAATCCAAGTCCACCCTGCATGTATTGACTACTATCAACCCAAAATCTATAAAAATCCGACATGCATACATTATGATTTTTGTTGCAATTATTTGTTCATCCTCATTGTTCAAGCCTTTGTCATCCAGATTACTATTGCTAACTACGGATCACACTCTGTTGTCTATTGAGTTTGTTTTTATGAATTTGTGAATCTCCTTGTCTAACTATATGTTTGTCATCTGACATAAATTGAACATGTAGATTTACCTCCTGGAAAAACCCCACTTGAATGGAACACGCGAATAAAGATTGCTCTTGGAGCTGCGAAAGGACTTACATATTTGCACGATGTAGCGAACCCTCCTGTTATTTACAAAGACATGAAAGCAGCAAATATTCTACTAGACGATGATTTCAACCCCAAACTGTCTGATTTTGGTCTCGCCAAACTTGGACCGGTTGGAGACAAAACTCATGTTTCCACCAGAGTTATGGGTACATATGGCTATTGTGCTCTAGACTATGCAATGAGTGGTAAGCTTACCCTCAAATCCGATGTATATAGCTTCGGGGTACTTCTTTTAGAGCTTATAAGTGGAAGAAGATCCTACGACTGTACCAAAGTTCGATCGGAGCAGAACCTATTAGTATGGGTAAGTCATTAA

Functional annotation

Database	accession number	e-value	annotation
nr	THU54920.1	1.7e-59	hypothetical protein C4D60_Mb11t01130
Swissprot	Q6I5Q6.1	2.7e-54	Receptor-like cytoplasmic kinase 185
trEMBL	A0A8J5G3A5	6.5e-61	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G02800.1	72.73	9e-56	213	CDL1	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G08742	AT5G02800.1	132	36	67	198	161	292	72.73	9e-56	213
AfisC2G08742	AT3G07070.1	137	40	63	199	163	299	70.80	3e-55	211
AfisC2G08742	AT5G18610.2	132	37	67	198	171	302	71.97	4e-55	210

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	69	185	73.1	1.9e-20

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0016021	C	integral component of membrane
GO:0002221	P	pattern recognition receptor signaling pathway
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0046658	C	anchored component of plasma membrane
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0040007	P	growth
GO:0007166	P	cell surface receptor signaling pathway
GO:0009506	C	plasmodesma
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0009941	C	chloroplast envelope
GO:0010183	P	pollen tube guidance
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0046777	P	protein autophosphorylation
GO:0071323	P	cellular response to chitin
GO:0090404	C	pollen tube tip
GO:1900150	P	regulation of defense response to fungus
GO:1900426	P	positive regulation of defense response to bacterium
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network