result

Gene information

Detail information of AfisC2G08820

Location

Gene	Chr	Start	End	Strand
AfisC2G08820	chr2	1453265455	1453267101	+

Sequences

CDS

Protein

Gene

>AfisC2G08820
TGGTATCGAATTAAACATCCAACTACTTCTCTCGCAAGGAACCGTACTTTCTTTACACCTCTCAAAATCAAATTTCTCCACCACCATTCATTCAAACTTCAAACCAAATCTATTCCATTCCATTCCATTCTTCATGGACGACTCTCAAATTTCACCTACACGCGTCGACCTCTCCTCCCTCCAAATTATCTCCGCCACCGGCCGCGGCGCCAAAGGCATCGTCTTCCTTGTCCGAAACACCTTCACCAACCAGACTCTCGCCCTCAAAGCCGTCTCCAAATCCTCCATCAAATCGAACAATGTCGACTCTCAACATCCCTTCCGCCGCATTCTCTTTGAACGCGACGTTCTTATTTCTCTTAACCATCCATTGCTTCCTTCCTTTCATGGATTTATTGAAACCGATAAAATATTAGGGTTTTTAATCGATTTCTGTTCCGGCGGAGATTTGGCTTCATTGCGGCGGCGGCAAACAGAGCAGATGTTTTCCGACGATTTGATGAGGTAACTTACAAACAAATTCCGACTTATGATTTTAGAAACTTCAAATATACGATCGTGATTTTTTATTTATTTGCGCTACAGATTCTATGCGGCGGAAATAGTACTAGCATTGGAATATCTGCACAAGCATGGTATAGTTTACAGAGATTTGAAACCCGAAAACATATTAATTCAGGATTCGGGTCACATAATGCTAGTCGATTTCGATCTATCAATAAAACTGCCAACAAGAACCAATTCGGTAAGAGAGCAGCTCGATCCACCTCCCACTGCAGAAAATAAGCCTAAAAAGCGTATGTTCAGGTGCGGTTGCTTTTCATCCAATTCGGGCATTTCACCCGAAATGCCTGACACGAATAAATCCGACAGCAACAAATCAATGTCTGGAAAATCGAACTCGTTTGTGGGGACGGAAGAGTACGTAGCGCCGGAAATAATAAAAGGAGATGGACACGATTTTGGAGTAGATTGGTGGAGTTTGGGAGTGGTAATGTACGAAATGCTGTACGGAAAAACTCCGTTTAAAGGGCAAAATAGGAAAGAGACATTTTATAGGATTTTGAGCAAGGAAACGGAGTTGGTGGGAGAAAGAACGGCGTTACGGGATCTGATAGGGAGGCTGCTGGAGAAGGATGCGGAGAAGAGAATAGGATTGGAAGAGATTAAACGGCATGAGTTTTTTAAGGGGGTAGATTGGGAAAAGATTTTGTTTGTTGAGAGGACTCCGTTTTTGCCTGAAGGGGTAGAATTGGAAGAGAAGGGTAGTTTGGCGATTGATGTGGGGGAATATGTGGAGGAGGTTTTTCGGGGAGCAAGGGAAAATTATGAAGATGGAGGAGTTCGGAACGACTGTGAGGTTAGTGAAAAAGAATTTGAATTGTTTTGAAAGCATCGTTCTAGAGATTGTTTCACTATTTAGAAAATAATAATGTAGAACATAGAACGATGGACCCCGTCAAGGATGCTAGGTTTGAATTGTCAGTTTTTTTAGTGTAAATTTATTGGAAAGATGGCTATAGGATAACATGTTTCTTATTGTTTCTTTGTAAGTATGCATATCGAAGAGGAAAGCATAAATTTTGATTTTGTTATGAACTAGTGCAATGCAAATCCCTATACCATGCACAGTGGTTCACCAAATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020245074.1	2.0e-64	serine/threonine-protein kinase OXI1-like
Swissprot	Q9LSF1.1	5.7e-56	Protein OXIDATIVE SIGNAL-INDUCIBLE 1
trEMBL	A0A8B9ASW3	4.3e-56	serine/threonine-protein kinase OXI1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G25250.1	55.31	3e-60	228	AGC2;AGC2-1;AtOXI1;OXI1	AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G08820	AT3G25250.1	226	92	4	1	219	164	387	55.31	3e-60	228
AfisC2G08820	AT4G13000.1	214	90	5	1	211	161	366	52.80	4e-55	211
AfisC2G08820	AT1G51170.1	227	94	9	2	213	169	382	46.26	3e-41	164

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	66	164	82.3	3.2e-23

Gene Ontology

Accession	Ontology	Name
GO:0000155	F	phosphorelay sensor kinase activity
GO:0000160	P	phosphorelay signal transduction system
GO:0000749	P	response to pheromone involved in conjugation with cellular fusion
GO:0003729	F	mRNA binding
GO:0005773	C	vacuole
GO:0004674	F	protein serine/threonine kinase activity
GO:0005198	F	structural molecule activity
GO:0005524	F	ATP binding
GO:0005730	C	nucleolus
GO:0005874	C	microtubule
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006979	P	response to oxidative stress
GO:0007018	P	microtubule-based movement
GO:0007623	P	circadian rhythm
GO:0008134	F	transcription factor binding
GO:0042802	F	identical protein binding
GO:0008728	F	GTP diphosphokinase activity
GO:0009507	C	chloroplast
GO:0009611	P	response to wounding
GO:0009630	P	gravitropism
GO:0009638	P	phototropism
GO:0009785	P	blue light signaling pathway
GO:0009860	P	pollen tube growth
GO:0009882	F	blue light photoreceptor activity
GO:0009898	C	cytoplasmic side of plasma membrane
GO:0009903	P	chloroplast avoidance movement
GO:0009904	P	chloroplast accumulation movement
GO:0009925	C	basal plasma membrane
GO:0009986	C	cell surface
GO:0010119	P	regulation of stomatal movement
GO:0010150	P	leaf senescence
GO:0010155	P	regulation of proton transport
GO:0010181	F	FMN binding
GO:0010362	P	negative regulation of anion channel activity by blue light
GO:0010540	P	basipetal auxin transport
GO:0015970	P	guanosine tetraphosphate biosynthetic process
GO:0015979	P	photosynthesis
GO:0019901	F	protein kinase binding
GO:0036290	P	protein trans-autophosphorylation
GO:0043332	C	mating projection tip
GO:0048766	P	root hair initiation
GO:0048825	P	cotyledon development
GO:0051782	P	negative regulation of cell division
GO:0061092	P	positive regulation of phospholipid translocation
GO:0080060	P	integument development
GO:0080147	P	root hair cell development
GO:1901981	F	phosphatidylinositol phosphate binding
GO:2000114	P	regulation of establishment of cell polarity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network