result

Gene information

Detail information of AfisC2G08857

Location

Gene	Chr	Start	End	Strand
AfisC2G08857	chr2	1461029760	1461035597	-

Sequences

CDS

>AfisC2G08857
ATGATCCCTTGCGAATCATCGTCAAGTTCAACCCGATTAGCGCCAGGATTTCGATTTCATCCAACAGATGAAGAGCTTGTTAGCTATTATTTGAAACGCAAGATATCAGGTCTGCCTCTGCGCGTAGACGCGATTGCGGAGATCGATTTGTATAAGAAGGAGCCATGGGAGTTGCCTTCTCTCTCGAAATTGCAAACCCGTGACATGGAGTGGTACTTTTTCAGTCCCTTGGATCGGAAGGATTCTAATAAGTTGCGGACGAGCAGGGGAACTATGGAAGGATACTGGAAAACTACAGGCAAGGATCGTGCTGTGAGGAATACGTATTCTAATGTTGTGGTTGGGATGAAGAAGACGCTTGTTTTTCATCAAGGGCGGGCGCCAAAAGGGAAGAGAACTAACTGGGTTATGCATGAGTATAGATTGGAGAGCTCCGAGAATGATGCTCCTAGTTCATGTGAAAATACTGCTCTTGTGCATCCTCAGGATTCCTTCGTTGTTTGTAGAATCTTTCAAAAGCATGGTTCTGGACCACAAAATGGAGCTCAGTATGGTGCACCATTTATTGCGGAAGAATGGGAAGATATTCATGATAATAAGACTCCAGAATGTGCAGAAAGGCATGGTAATGGCCATGATGCAGCATTAACGTGTCTCACTAATGAGCGATATTATGCCGAACTTGATATTGACATGAACGAGATACTGGCAAATCATCAAGATAACAACGAATCGACAAACTCAAAAGATTGTCAAAGTCATGCAGATGAACCGACTCAATATCAACTAGTAGACAATCCAGTTGCAGACCATCTATCTGCAGAACAAATTTGTGATAGTCATGCATATGATATTTCCTTTACACTTGAGGATTTAATTGATTTTGATAAGCCAAATAACATAGATGGAAACTTGCAAGAAAATGTCGTTTGTATTGATGGTAACACAGCACGAAACTCTAGCATTGCATCAGACAAGAGTGATGGATATCTGGAACTAAATGATGTTTATGCAAATGCAAATGGACATTGCACCAACAACACTTTAGACGATTGCATCAGAGCAAACCATGCAAGTAATGCCAACACCTCTCTAAAAATAGAAGATGCCGAGATCTTCAACAATTCCAATTCGACAACAGCTACCGAAGGAGTACAAAGTATGCAGCCATATGATTATCTTAATCCTACAGATGTTAATTATCTTGAAGACGATACCATGTTTTACGATGCACCTAGCAACGATGTTCAGTTTACAGAAGATACTTATATGAACATAAACGAATACAATCCTACTGTTACTGATTTTGATTTGGTGGATGATTTGATGGCTTATTTCGATGCGACGGAACAAAATTTTGATCCTTTAAGTGCAGATCAGTCAGACATTAACAATCCTACAGTCAAGTCAGAGGTGGAGGGCAGCAACTATCCTACAGGAAAAGATTGCCTAGAGACTCCTGGAACAAATATGGGAATGGGTGCACCATCTACCGAATTCATAGATGCTGCCAATCCATTGGAAAAGACTAACGTGGAAGCAAATGACGGTTGGAACAAGTCATTTAGAAAGCATGTTGTGGATATGCTGGGGTCGATTTCTGCACCACCTGCAATGGCTGCTGCTGATTCGTGTAAAGGCAAAGGTATTCAGATATCGAGTAATGGAAGCAGCTCATCTATTCGTGTTTCTGCAGGTATGATCCAGATACGTGGTATTTCAGTCACGGGACATCCAGAAAAGTGGAGCCTATCGAAGGATGGAGAAATAAGCTTCATCTATACCTACGCAAATGGCGCAGTTTGCAAATTAGCAAGCCGTCAACCACCACCTGCCACTGTTTTTGGAGTGTTGCTTCGAAGTGGAATATTTCTTTTTGGCTTCTCTGCGATCGTTCTTTCCATAACCATGAAGCTAGGAGTGGGTGTTTATGGGAAATAA

Protein

Gene

>AfisC2G08857
ACCCTAATCCACACTCACACACTGCTCTGACAATTTAGATGTTAAAATAGCCTACCTGATCTCTTTTTCTTCTATTTCGAAGACGCCTACTCAAACCAACACGCCTTTCTTTTCCCTTTCTTATCTTCTCCAATACACACAATCATTCTGATATCCGATAAAATTCAATGATCCCTTGCGAATCATCGTCAAGTTCAACCCGATTAGCGCCAGGATTTCGATTTCATCCAACAGATGAAGAGCTTGTTAGCTATTATTTGAAACGCAAGATATCAGGTCTGCCTCTGCGCGTAGACGCGATTGCGGAGATCGATTTGTATAAGAAGGAGCCATGGGAGTTGCCTTCTCTCTCGAAATTGCAAACCCGTGACATGGAGTGGTACTTTTTCAGTCCCTTGGATCGGAAGGATTCTAATAAGTTGCGGACGAGCAGGGGAACTATGGAAGGATACTGGAAAACTACAGGCAAGGATCGTGCTGTGAGGAATACGTATTCTAATGTTGTGGTTGGGATGAAGAAGACGCTTGTTTTTCATCAAGGGCGGGCGCCAAAAGGGAAGAGAACTAACTGGGTTATGCATGAGTATAGATTGGAGAGCTCCGAGAATGATGCTCCTAGTTCATGTGAAAATACTGCTCTTGTGCATCCTCAGGTGAAATTTCTATGCAAATTCCATTTACTGATCAGATTTTGGGTTTTTAGGGCTTTTATGCACAAGAAATTTGTTTTTGGTACATGTTTAAATTGATGATAGTATTGTAAACCACATAATTGTTTCATTTCACTCTATATATAATATGAGGTAAGAACTGGACTTTTTTAGTATAGTATAAAAGAGAAATTGGAGGTCTTAGAGTCATGTAAGAATGTTGTGTACTAGTACGTCCTTGGATAGAGTTATGCAATCACTTATTGGATATATATTATTTGAGTTTATGACCTTTGATCTTGATGTTACTAAGTAACATAGTGGCCTTCCTTGCTTTGATGCAAAAATTTACTTGATGAATTAAAGGTGCAAAATAAGACATATTATGAGAGCTTTGACATTATTTCATATTCTTATGATATAGCTATTTGAATAGCTTGTTTGGTGTAGTTTTGAATTTGATTATGCTATAACTAGCAGTAACTCAGTTGAATTAATGTATTATATTGTGGTTCCTTGGTGGAAAGGATTCCTTCGTTGTTTGTAGAATCTTTCAAAAGCATGGTTCTGGACCACAAAATGGAGCTCAGTATGGTGCACCATTTATTGCGGAAGAATGGGAAGATATTCATGATAATAAGACTCCAGAATGTGCAGAAAGGCATGGTAATGGCCATGATGCAGCATTAACGTGTCTCACTAATGAGCGATATTATGCCGAACTTGATATTGACATGGTATGTGCTCTTTTTTCCTTGTGCCAAGTTTTTGTCATTGGTTAGAATGGTTATCCTAATAAAGCGTAGATAAGTCAGTGAATGCTAGTTTAATGGTTGTTTTGATATATGAATTTGCATACTTCTTAGAATTTGTGTACTTCTTAATGCAGATGCATTTACTTAATTTTTTAAATGTCAGTTCCATCCAAGTTACCTTATTACTTATGTTGAACATCTTTATCTCAGAATTGCCTTTCTTCATCGAAAGTGATTTATTTTGGTTATCTTGTAACTGTAGATGCAGATTCTGTATTCATATTTATTCCACTTGTATAAATATTACGGTATTATTACTTAATTACAGAGTTGTGGTACGATTTCAGGGTGGCTATGTTACTAAAATCTACATAGTAAAGAGCATATGTACAAATCTTTCTTGAGCATGGATTTATTTGAGCTTGAGCTCTAATTATCAAAGTGATATATGCATTTTGCATAATACAAATGCACTGAACATGATATAAGTTAAAATTAAAGGTTGAATAATCCGTCAAACGGATAAAAATTTACAATTGTATGCCTGGGGCGAGAATTTGAATGTTCAATATGTGAATTTGCTATAGAATCTTAGTTAGTGTCACAGTATGATCATATGATGAAGTCCTATTCTAGGATGAAAACAATCTTACATTATTGTTTGGACAAAACAGTATGTGCTATAATTCAAGAACATATATCTATCATGTCTAACATACTCTTCTAATTATGAACAAAAGAATATAGTTATGTATACCTACTAGTATTCATTTTTGACATTTTACCTCATTGGCAAATGTTTCTACTTTGTATATTTTTCTAAAAAGCAGCTCGCCATTTACTTGGTATTCACGTATTTTGATAAAAAAGTCCGCGTAGTTTACGAATTGGACTCTTTGTGATGTGTACAGTTCAAGATTCGAGGTAGGCCTGTAAACGGATACTTTTGGATACGGATGGTGCTATATCCGTATCCGTATCCAAAATCATTTTCGGATATAGGGTACCTATATCCGCGGATGCAGACGGATATCAGATATTTGTCGGATATTCTTCGACCAGTTCACAACCAATAAATCTAAACAAATAAATAGAAAATTTTGATTTATTACAAATCCATTTTTGTACTAAGTATATACAAAATAATAAATACACTAAGAGAAAAAAATTAAGCGGTAAAAATTGATTTTTATATACATATTACTTTTTTTACCTGGATAAAATAGTAAACGACAATCATTTTATGTACTAAATACATTAAAAATAATAATTATAATCTTGATAAAAACCGGACGGATAATTAGCGGATACTCCGTTTTTCGGATATCGTATAATTTTCATATTTCGGATACAGATTTTAGATTTTTCGAGTACTAATTAACAGCCATAATTCGAGGTTTCAGCCGGAACACTCAAATTTCAGTCGATCCATCCTGGTTTTGGTAGAGATCGAAACAAACCATACCGAAATTCCAGTTCTAGTTAGAAAAGGCTAGTAAACTTTAAATCCATATAGAAAATTTTCATGAAATTCAAAGTTTACAAGTATCTGGATATTCAAAATCTAAAATTTAACTTCAAAAACAAATAAATTATGTAGTATATGAATAGTAAAATTGAAAGAAGTTGAAAACATAATAAATTAATCAACATTTATCAGTATTGTTGTTATAAATATTTTTTATTGATCAATAGTGACTGTTTGTCTTCTTTGGCATTTAAAAAATACAATATATACATTTTCTTCTAATAAATTTAACATATATCATTGTAATTTTGTAAAATAAAATAAATATTAAAATTGGAGGTGCGGTTTGGAACCAGAATTGTCTATATAGATCGAAATTTCTATAGGCTTAAAATAAAGAAAATGAAACTTTGTATAATGCACATCTTGTTAGAATACAAATTTACAAATATATAATTTTTAGTAATCTATTTTTATATAAAAAAATAATTATTAATTCGAAACTGGAATTGAAACCGAAATTGACAAGAATTTCAAAAAATTTAAATGACCAAAACGGAACTGGAATCCGAAATCTTGAACCTTGAGTTCTAATTCACAAGTTCATTCAAATAATGTTGAAATAATATTTTTTTGCACATATAGAGAGATGAAATCATTTATCGAGTTTGTCAAACTGCTTCTTGTACTTTCTTTTTTCCTTTTTCTTTCATATGATTGTCTTTTCCCATCTTACGTAAAGTAAAAAAAAAACATTGTATGCAATGAATAACGCACCAGAACTGGTAACAATATACATCTTAACTGTCTTTCCCATGTTAGCTAAGCCATGATGTGCTCAAAAGGTTTGGTATTGTTTGGAGTGAAGGGGTAATTGTTATATGCTAAGTCCTGTGTTTATTATTGTATATTTAGTCCCAATGGTGTAAACACAATGGCACAGATATTTGCAGTTACTCTGCTCGTTATTCATTGAGCAGTTGGGTAATCTGTAAATAGTATGTGGCTATTTTCTTCAATTCCCCTACAAAATTCTATTTCCTTCTGTTACAATTGTCCCTCGAAAGTATTAACGGTCGAAATAAGTCTGAAAGTTTGTCTTATTATTCTGCTAAACCTCATTCTAATTATCTCTGAGTGTCACTTCATGACTGTAATGTTATGTTTGTTCTCTTTCTAGAACGAGATACTGGCAAATCATCAAGATAACAACGAATCGACAAACTCAAAAGATTGTCAAAGTCATGCAGATGAACCGACTCAATATCAACTAGTAGACAATCCAGTTGCAGACCATCTATCTGCAGAACAAATTTGTGATAGTCATGCATATGATATTTCCTTTACACTTGAGGATTTAATTGATTTTGATAAGCCAAATAACATAGATGGAAACTTGCAAGAAAATGTCGTTTGTATTGATGGTAACACAGCACGAAACTCTAGCATTGCATCAGACAAGAGTGATGGATATCTGGAACTAAATGATGTTTATGCAAATGCAAATGGACATTGCACCAACAACACTTTAGACGATTGCATCAGAGCAAACCATGCAAGTAATGCCAACACCTCTCTAAAAATAGAAGATGCCGAGATCTTCAACAATTCCAATTCGACAACAGCTACCGAAGGAGTACAAAGTATGCAGCCATATGATTATCTTAATCCTACAGATGTTAATTATCTTGAAGACGATACCATGTTTTACGATGCACCTAGCAACGATGTTCAGTTTACAGAAGATACTTATATGAACATAAACGAATACAATCCTACTGTTACTGATTTTGATTTGGTGGATGATTTGATGGCTTATTTCGATGCGACGGAACAAAATTTTGATCCTTTAAGTGCAGATCAGTCAGACATTAACAATCCTACAGTCAAGTCAGAGGTAATTTCAGATTATTGTTTGTTTAAAATACACTATGGTAACACTTATTTCATGAAATGTTAATTAAACTGCAGGTGGAGGGCAGCAACTATCCTACAGGAAAAGATTGCCTAGAGACTCCTGGAACAAATATGGGAATGGGTGCACCATCTACCGAATTCATAGATGCTGCCAATCCATTGGAAAAGACTAGTAAGAATGACATGATAGTCACAGGTTTTATTTTTGGTTGTTAGCAAACCAGTGATTTTCTTGCTAGAACTAGTTTCGTTCTGTTCAAATTTGCCTTATCCAAGTTTTAAACTTGGTAAAAGTACACTTGATGTTACTAAATTTTGTTGGTGTAGATAGAAAAACTAGTGGCGACATTGTGAACTTAATTAAATCATATGATCTTTTTTATCAAGCAACTAAAATGAAAATATATTGTTTGTTAGACGTGGAAGCAAATGACGGTTGGAACAAGTCATTTAGAAAGCATGTTGTGGATATGCTGGGGTCGATTTCTGCACCACCTGCAATGGCTGCTGCTGATTCGTGTAAAGGCAAAGGTATTCAGATATCGAGTAATGGAAGCAGCTCATCTATTCGTGTTTCTGCAGGTATGATCCAGATACGTGGTATTTCAGTCACGGGACATCCAGAAAAGTGGAGCCTATCGAAGGATGGAGAAATAAGCTTCATCTATACCTACGCAAATGGCGCAGTTTGCAAATTAGCAAGCCGTCAACCACCACCTGCCACTGTTTTTGGAGTGTTGCTTCGAAGTGGAATATTTCTTTTTGGCTTCTCTGCGATCGTTCTTTCCATAACCATGAAGCTAGGAGTGGGTGTTTATGGGAAATAACTAAGTTTTCTGAGACCAAAAAAAACTCTCTGTTCATGCTTTGATCATAGATTTCAGAGGTTGGAAGACAAAAACAAGAATAATGTTATGTTTTGAATAAATTTGTTGTGTGCTTGGATTATGTACCCATTCTTCTGACTATTACTGTTGACTTGAGCTAATTTATTGCGCTAATATTCAACCTATTATATGGATCATCTGTGCAAATTTGGTATCTTCAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010935812.1	8.6e-105	NAC domain-containing protein 78 isoform X1
Swissprot	Q949N0.1	4.2e-64	Protein NTM1-like 4
trEMBL	A0A6I9S254	6.2e-105	NAC domain-containing protein 78 isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G04410.1	62.57	1e-67	254	anac078;NAC2	NAC domain containing protein 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G08857	AT5G04410.1	187	60	3	9	195	5	181	62.57	1e-67	254
AfisC2G08857	AT3G10500.1	181	56	3	9	189	5	175	63.54	2e-64	244
AfisC2G08857	AT3G10480.1	190	67	4	6	195	20	199	59.47	2e-62	237

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	15	142	95.0	3.4e-27

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005730	C	nucleolus
GO:0005789	C	endoplasmic reticulum membrane
GO:0008283	P	cell proliferation
GO:0009555	P	pollen development
GO:0009819	P	drought recovery
GO:0009644	P	response to high light intensity
GO:0009651	P	response to salt stress
GO:0009723	P	response to ethylene
GO:0009737	P	response to abscisic acid
GO:0009753	P	response to jasmonic acid
GO:0009962	P	regulation of flavonoid biosynthetic process
GO:0010029	P	regulation of seed germination
GO:0010114	P	response to red light
GO:0010200	P	response to chitin
GO:0010224	P	response to UV-B
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0031930	P	mitochondria-nucleus signaling pathway
GO:0042803	F	protein homodimerization activity
GO:0043068	P	positive regulation of programmed cell death
GO:0045770	P	positive regulation of asymmetric cell division
GO:0045995	P	regulation of embryonic development
GO:0046982	F	protein heterodimerization activity
GO:0048103	P	somatic stem cell division
GO:0048317	P	seed morphogenesis
GO:0048527	P	lateral root development
GO:0048759	P	xylem vessel member cell differentiation
GO:0048829	P	root cap development
GO:0051091	P	positive regulation of sequence-specific DNA binding transcription factor activity
GO:0070301	P	cellular response to hydrogen peroxide
GO:0071365	P	cellular response to auxin stimulus
GO:2000377	P	regulation of reactive oxygen species metabolic process
GO:0080060	P	integument development
GO:0090400	P	stress-induced premature senescence
GO:0090602	P	sieve element enucleation
GO:1900057	P	positive regulation of leaf senescence
GO:1900409	P	positive regulation of cellular response to oxidative stress
GO:1901348	P	positive regulation of secondary cell wall biogenesis
GO:1902074	P	response to salt
GO:1904250	P	positive regulation of age-related resistance
GO:1990110	P	callus formation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network