Detail information of AfisC2G09008


Location
GeneChrStartEndStrand
AfisC2G09008chr214887765411488784091+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_009396840.12.3e-57PREDICTED: heat stress transcription factor A-1-like
SwissprotQ84T61.14.7e-55Heat stress transcription factor 3
trEMBLA0A804IQU21.7e-57(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G32330.150.975e-68 254ATHSFA1D;HSFA1Dheat shock transcription factor A1D

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag167249.t1
Allium fistulosumAfisC2G09008
Allium sativumAsa6G00501.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00447.14HSF_DNA-bindFamily18107110.15.5e-32

Gene Ontology
AccessionOntologyName
GO:0005783Cendoplasmic reticulum
GO:0005634Cnucleus
GO:0005774Cvacuolar membrane
GO:0007034Pvacuolar transport
GO:0042802Fidentical protein binding
GO:0009644Presponse to high light intensity
GO:0009733Presponse to auxin
GO:0009958Ppositive gravitropism
GO:0010200Presponse to chitin
GO:0010286Pheat acclimation
GO:0044212Ftranscription regulatory region DNA binding
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0031410Ccytoplasmic vesicle
GO:0032268Pregulation of cellular protein metabolic process
GO:0034605Pcellular response to heat
GO:0034620Pcellular response to unfolded protein
GO:0042542Presponse to hydrogen peroxide
GO:0048527Plateral root development
GO:0048530Pfruit morphogenesis
GO:0071456Pcellular response to hypoxia

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09419HSFF; heat shock transcription factor, other eukaryoteEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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