Gene | Chr | Start | End | Strand |
---|---|---|---|---|
AfisC2G09027 | chr2 | 1496932338 | 1496951321 | + |
CDS |
Protein |
Gene |
Database | accession number | e-value | annotation |
---|---|---|---|
nr | XP_020260816.1 | 5.9e-243 | lysine-specific demethylase JMJ706-like isoform X1 |
Swissprot | Q336N8.1 | 4.7e-205 | Protein JUMONJI 706 |
trEMBL | A0A5P1F082 | 4.3e-243 | JmjC domain-containing protein |
TAIR id | % identity | e-value | bit score | gene aliases | Short description |
---|---|---|---|---|---|
AT5G46910.1 | 50.07 | 0.0 | 682 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
Species | Genes |
---|---|
Allium cepa | g56166.t1 |
Allium fistulosum | AfisC2G09027 |
Allium sativum | Asa6G00496.1 |
Arabidopsis thaliana | AT5G46910.1 |
Oryza sativa | LOC_Os10g42690.1 |
Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
---|---|---|---|---|---|---|
PF02375.14 | JmjN | Family | 103 | 135 | 49.8 | 2.2e-13 |
PF02373.19 | JmjC | Domain | 279 | 402 | 135.4 | 1e-39 |
PF02928.13 | zf-C5HC2 | Domain | 500 | 550 | 29.8 | 5.2e-07 |
Accession | Ontology | Name |
---|---|---|
GO:0051276 | P | chromosome organization |
GO:0000792 | C | heterochromatin |
GO:0003677 | F | DNA binding |
GO:0003712 | F | transcription cofactor activity |
GO:0046872 | F | metal ion binding |
GO:0005654 | C | nucleoplasm |
GO:0016491 | F | oxidoreductase activity |
GO:0007276 | P | gamete generation |
GO:0007623 | P | circadian rhythm |
GO:0009719 | P | response to endogenous stimulus |
GO:0010033 | P | response to organic substance |
GO:0045892 | P | negative regulation of transcription, DNA-templated |
GO:0016573 | P | histone acetylation |
GO:0016740 | F | transferase activity |
GO:0030154 | P | cell differentiation |
GO:0031057 | P | negative regulation of histone modification |
GO:0032453 | F | histone demethylase activity (H3-K4 specific) |
GO:0032454 | F | histone demethylase activity (H3-K9 specific) |
GO:0034720 | P | histone H3-K4 demethylation |
GO:0045815 | P | positive regulation of gene expression, epigenetic |
GO:0048439 | P | flower morphogenesis |
GO:0048522 | P | positive regulation of cellular process |
GO:0048581 | P | negative regulation of post-embryonic development |
GO:0048585 | P | negative regulation of response to stimulus |
GO:0051716 | P | cellular response to stimulus |
GO:0060560 | P | developmental growth involved in morphogenesis |
GO:0060603 | P | mammary gland duct morphogenesis |
GO:1902494 | C | catalytic complex |
GO:2000028 | P | regulation of photoperiodism, flowering |
GO:2000242 | P | negative regulation of reproductive process |
KO | Name | Enzyme ID | Pathway | Pathway ID |
---|---|---|---|---|
- | - | - | - | - |