result

Gene information

Detail information of AfisC2G09028

Location

Gene	Chr	Start	End	Strand
AfisC2G09028	chr2	1497091583	1497093814	+

Sequences

CDS

>AfisC2G09028
ATGTATGTCTCCGATCATCAAGGAGGAGACCTCTCCGACATCATCCGCAGCGCAGGCCACACCAACCAACCAGAAACTGACACTTGGCAAATCCCCGAAAGCATTGAGCAACTTCCGACCGACATCAAGTTCGACACAGTCATCGATGATTCTCTGTTGTCTTCCTGCTTTGAAAGTGTCCCTGAAAAATCCAACGTTGAAAGTGAAATGATGATAAACAAACCGACTGGTAATATTTTTTCTAGGGTGCTTCAAGTTTCGCCTGTGAAGCCTTTGCCTATGGTGGTCGGAGTTGATGGTGATCGTACGGTTAGGACTGATCGTGTGGTGCAGATGTCTTCGCCTCGTGTTCCTCCAGGAATGATCAAGAGAAGAAAAAGTCTAGCAAAGAAAGTGGTGTGTATTCCTGCACCAGCTGCAGCAAGTAGTAGTGGCAGTAGCAATAGGCCAAGTAGTGGTGAAGTTGTTCCTTCTGATCTTTGGGCTTGGAGAAAATATGGTCAAAAACCTATTAAAGGTTCTCCTTTTCCTAGGGGGTATTACAGATGCAGCAGTTCAAAGGGATGCTCAGCAAGAAAGCAAGTAGAAAGAAGCAGAACTGACCCAAACATGTTAGTCATCACTTACACTTCTGAACACAATCATCCTTGGCCCACCCAACGTAATGTACTTGCCGGTTCCACTCGATCCACTTATCCATCCAAAACTCAAAGGCCAAATTCAAATTCAAATTTGAACGTTGTCGGAGACTCAAAGAGTACAAACACATTGCCTGGGATTAAAGAAGAAGTATCCAACATGAACTTAGAAAATAATGAGAAGTTAAAGTTTTACAACGCAAATACTGCAAAGTATACTACAGAGTTATCTGATGATCATTTGTTCGCTGATTTAGCAGAGTTGGAGAGTGATTCGATGAGTTTGATATTCGAAAAAACGGAACATGAAGACATTGATAAGTCTTCACTTTGCAATATATTTGATTGGGGAGAGAGTCCATTAGCCTCATTAACTGAAGACTGTTCGAATAAAAATTTACAGTGA

Protein

Gene

>AfisC2G09028
GCTTCCATCTCTTCAATTTCATAACTAATTTCATAACCAATTACATAACCTAAAACATATCATCATGTATGTCTCCGATCATCAAGGAGGAGACCTCTCCGACATCATCCGCAGCGCAGGCCACACCAACCAACCAGAAACTGACACTTGGCAAATCCCCGAAAGCATTGAGCAACTTCCGACCGACATCAAGTTCGACACAGTCATCGATGATTCTCTGTTGTCTTCCTGCTTTGAAAGTGTCCCTGAAAAATCCAACGTTGAAAGTGAAATGATGATAAACAAACCGACTGGTAATATTTTTTCTAGGGTGCTTCAAGTTTCGCCTGTGAAGCCTTTGCCTATGGTGGTCGGAGTTGATGGTGATCGTACGGTTAGGACTGATCGTGTGGTGCAGATGTCTTCGCCTCGTGTTCCTCCAGGAATGATCAAGAGAAGGTAAACTATAAAAACTGTTTTACAGTTTTAGGTTCATATATACTTAGCTCATTTATTTCAATATGGACAGCTTAAACAAACTAATTGCAACATATATTACATGTATTACTTGTTTATTAAAAGTTTGATGAAGTGCTTAAAACCGACAAACATATATATATTATGATAAGATTCATTAGTTTGGAATAATAAGTTGGGAGATTGAAAGTTTTTGAGCTTTAGAACAATATGTTTATTCTGCTAACCTAGCTATAAGTATGATTAAGTTTATATGGTGGAAAAACAAAACAGAAAAAGTCTAGCAAAGAAAGTGGTGTGTATTCCTGCACCAGCTGCAGCAAGTAGTAGTGGCAGTAGCAATAGGCCAAGTAGTGGTGAAGTTGTTCCTTCTGATCTTTGGGCTTGGAGAAAATATGGTCAAAAACCTATTAAAGGTTCTCCTTTTCCTAGGTATTCTTCTATTTTCATTTTTTATTTGCAATTTGTATTTATATTAGAAGAAACCTGCAGACTTCAAGTTCCAAAAATGGCATGGTGAAATGTTATATATGAATTTCAGTACGAGTCTAGTCTTATTCTCTGATGCAATGGAAAGATTTTTGCACAAGACTCAACTTCTATCCATTTTCAAATATTACAAATAATTTATTGTTATTGTTATTGCTATTCATGCACCTCTTGATTGATGTTTCCAAGGGAAAATTAGAGTTCCAGACATGGTATGTTGAAATTGTTATAAATTTCAGTAGGATTCTAGTTTTAAACTTAATTCTTTAGAGAAAACGACATAAGATGAAAAGCTTCGGGTTCTTGATTCTACATTATTATTATTATTATCATTTGTAACTTCTAACTAAGAGTTGCTTATGTTCATTTATTGATATCTCAATGTTTTGAACGATAAACTATTTTTCTGACAGTATTATCAATTTTTGAATCAATGTGTTTATATGCATTTAGTTCTTTACCAAGCAGCCTCTTAATATGCTTCCTCAAATAGACAAGTAACCTTGTTGATTATAGTATTCTTGCCTTAGAATTATTCAGGTTGAACTTAAATCTCAATGAAGTTGAATTTTTTAAGTCACTACACATGAACTACTCTTTTAATTCTTAGATCTATCTTATTATCCAACTCTTTTCTTATATGATCTCATCTGTTAGTTCAACATATTCTCCTTATACATCACAATCAAAAGCAAAAACCCATATATATAAATGTAAATTTCAGGGGGTATTACAGATGCAGCAGTTCAAAGGGATGCTCAGCAAGAAAGCAAGTAGAAAGAAGCAGAACTGACCCAAACATGTTAGTCATCACTTACACTTCTGAACACAATCATCCTTGGCCCACCCAACGTAATGTACTTGCCGGTTCCACTCGATCCACTTATCCATCCAAAACTCAAAGGCCAAATTCAAATTCAAATTTGAACGTTGTCGGAGACTCAAAGAGTACAAACACATTGCCTGGGATTAAAGAAGAAGTATCCAACATGAACTTAGAAAATAATGAGAAGTTAAAGTTTTACAACGCAAATACTGCAAAGTATACTACAGAGTTATCTGATGATCATTTGTTCGCTGATTTAGCAGAGTTGGAGAGTGATTCGATGAGTTTGATATTCGAAAAAACGGAACATGAAGACATTGATAAGTCTTCACTTTGCAATATATTTGATTGGGGAGAGAGTCCATTAGCCTCATTAACTGAAGACTGTTCGAATAAAAATTTACAGTGATGTATCTAGTGAAGTTATAATTCAATAGTATTGACAATTGAACAAGTTAGCT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020571994.1	5.0e-59	probable WRKY transcription factor 14
Swissprot	Q9SA80.2	1.7e-48	WRKY DNA-binding protein 14
trEMBL	A0A4S8KGR2	6.2e-59	WRKY domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G30650.1	54.44	9e-56	214	AR411;ATWRKY14;WRKY14	WRKY DNA-binding protein 14

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G09028	AT1G30650.1	248	74	10	110	329	177	413	54.44	9e-56	214
AfisC2G09028	AT2G34830.1	311	102	12	49	310	101	395	46.30	2e-54	209
AfisC2G09028	AT4G01250.1	107	24	1	123	229	109	199	62.62	1e-34	144

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	159	216	90.6	5.4e-26

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0007263	P	nitric oxide mediated signal transduction
GO:0009555	P	pollen development
GO:0009626	P	plant-type hypersensitive response
GO:0009739	P	response to gibberellin
GO:0009793	P	embryo development ending in seed dormancy
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0010150	P	leaf senescence
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0043531	F	ADP binding
GO:0043565	F	sequence-specific DNA binding
GO:0051607	P	defense response to virus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network