Gene information

Detail information of AfisC2G09030

Location

Gene	Chr	Start	End	Strand
AfisC2G09030	chr2	1497446611	1497447428	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	PKA52178.1	1.6e-34	Serine/threonine-protein kinase AFC2
Swissprot	Q8RWH3.1	3.3e-29	Dual specificity tyrosine-phosphorylation-regulated kinase YAK1
trEMBL	S8E4J7	1.1e-34	Protein kinase domain-containing protein (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G35980.1	51.06	2e-31	131	YAK1	yeast YAK1-related gene 1

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G09030	AT5G35980.1	141	66	2	17	156	79	217	51.06	2e-31	131
AfisC2G09030	AT5G35980.2	136	65	1	21	156	84	217	50.74	5e-31	130
AfisC2G09030	AT4G24740.1	133	78	4	36	166	80	203	33.08	4e-15	77.4

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	59	166	38.8	6.1e-10

Gene Ontology

Accession	Ontology	Name
GO:0007017	P	microtubule-based process
GO:0000151	C	ubiquitin ligase complex
GO:0000793	C	condensed chromosome
GO:0000281	P	mitotic cytokinesis
GO:0000287	F	magnesium ion binding
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0005654	C	nucleoplasm
GO:0005813	C	centrosome
GO:0005938	C	cell cortex
GO:0007224	P	smoothened signaling pathway
GO:0009506	C	plasmodesma
GO:0009737	P	response to abscisic acid
GO:0009792	P	embryo development ending in birth or egg hatching
GO:0010803	P	regulation of tumor necrosis factor-mediated signaling pathway
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0030145	F	manganese ion binding
GO:0032436	P	positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042771	P	intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043130	F	ubiquitin binding
GO:0043186	C	P granule
GO:0045167	P	asymmetric protein localization involved in cell fate determination
GO:0045725	P	positive regulation of glycogen biosynthetic process
GO:0046777	P	protein autophosphorylation
GO:0048593	P	camera-type eye morphogenesis
GO:0051534	P	negative regulation of NFAT protein import into nucleus
GO:0072577	P	endothelial cell apoptotic process
GO:0072686	C	mitotic spindle
GO:0097191	P	extrinsic apoptotic signaling pathway
GO:1903864	P	P granule disassembly

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network