Detail information of AfisC2G09295


Location
GeneChrStartEndStrand
AfisC2G09295chr215450666971545079825-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020257804.17.0e-217B3 domain-containing protein Os07g0563300-like
SwissprotQ0D5G4.29.6e-171B3 domain-containing protein Os07g0563300
trEMBLA0A5P1FHB55.1e-217TF-B3 domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G32010.141.072e-124 443HSI2-L1;HSL1;VAL2HSI2-like 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag348578.t1
Allium fistulosumAfisC2G09295
Allium sativumAsa6G00314.1; Asa6G00315.1
Arabidopsis thaliana
Oryza sativaLOC_Os07g37610.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family34644550.71.2e-13
PF07496.12zf-CWDomain59863938.01.1e-09

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0001076Ftranscription factor activity, RNA polymerase II transcription factor binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005739Cmitochondrion
GO:0005829Ccytosol
GO:0005634Cnucleus
GO:0009536Cplastid
GO:0009657Pplastid organization
GO:0009733Presponse to auxin
GO:0009737Presponse to abscisic acid
GO:0010030Ppositive regulation of seed germination
GO:0010262Psomatic embryogenesis
GO:0010344Pseed oilbody biogenesis
GO:0010601Ppositive regulation of auxin biosynthetic process
GO:0044212Ftranscription regulatory region DNA binding
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0031930Pmitochondria-nucleus signaling pathway
GO:0048573Pphotoperiodism, flowering
GO:2000034Pregulation of seed maturation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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