Detail information of AfisC2G09576


Location
GeneChrStartEndStrand
AfisC2G09576chr215980013201598008471-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008810692.14.1e-124tubby-like protein 4
SwissprotQ6ETL2.21.7e-106Tubby-like F-box protein 13
trEMBLA0A8B8ZSA83.9e-124tubby-like protein 4

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G16070.150.131e-99 360AtTLP8;TLP8tubby like protein 8

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Ortholog group
SpeciesGenes
Allium cepag333881.t1
Allium fistulosumAfisC2G09576
Allium sativumAsa6G00216.1
Arabidopsis thalianaAT1G16070.1; AT1G16070.2
Oryza sativaLOC_Os02g08310.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01167.15TubDomain173413145.91.2e-42

Gene Ontology
AccessionOntologyName
GO:0005829Ccytosol
GO:0005634Cnucleus
GO:0005929Ccilium
GO:0006355Pregulation of transcription, DNA-templated
GO:0009620Presponse to fungus
GO:0035091Fphosphatidylinositol binding
GO:0061512Pprotein localization to cilium

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K19600TULP1; tubby-related protein 1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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